KEGG   PATHWAY: bpy01100
Entry
bpy01100                    Pathway                                
Name
Metabolic pathways - Paraburkholderia phytofirmans PsJN
Class
Pathway map
bpy01100  Metabolic pathways
bpy01100

Module
bpy_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bpy01100]
bpy_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bpy01100]
bpy_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bpy01100]
bpy_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:bpy01100]
bpy_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bpy01100]
bpy_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bpy01100]
bpy_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:bpy01100]
bpy_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:bpy01100]
bpy_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bpy01100]
bpy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bpy01100]
bpy_M00012  Glyoxylate cycle [PATH:bpy01100]
bpy_M00015  Proline biosynthesis, glutamate => proline [PATH:bpy01100]
bpy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:bpy01100]
bpy_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bpy01100]
bpy_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bpy01100]
bpy_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:bpy01100]
bpy_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bpy01100]
bpy_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:bpy01100]
bpy_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:bpy01100]
bpy_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:bpy01100]
bpy_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:bpy01100]
bpy_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:bpy01100]
bpy_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:bpy01100]
bpy_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:bpy01100]
bpy_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bpy01100]
bpy_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bpy01100]
bpy_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bpy01100]
bpy_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bpy01100]
bpy_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bpy01100]
bpy_M00063  CMP-KDO biosynthesis [PATH:bpy01100]
bpy_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:bpy01100]
bpy_M00082  Fatty acid biosynthesis, initiation [PATH:bpy01100]
bpy_M00083  Fatty acid biosynthesis, elongation [PATH:bpy01100]
bpy_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:bpy01100]
bpy_M00087  beta-Oxidation [PATH:bpy01100]
bpy_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bpy01100]
bpy_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bpy01100]
bpy_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:bpy01100]
bpy_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:bpy01100]
bpy_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bpy01100]
bpy_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:bpy01100]
bpy_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:bpy01100]
bpy_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:bpy01100]
bpy_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bpy01100]
bpy_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:bpy01100]
bpy_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:bpy01100]
bpy_M00149  Succinate dehydrogenase, prokaryotes [PATH:bpy01100]
bpy_M00151  Cytochrome bc1 complex respiratory unit [PATH:bpy01100]
bpy_M00155  Cytochrome c oxidase, prokaryotes [PATH:bpy01100]
bpy_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:bpy01100]
bpy_M00168  CAM (Crassulacean acid metabolism), dark [PATH:bpy01100]
bpy_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:bpy01100]
bpy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bpy01100]
bpy_M00417  Cytochrome o ubiquinol oxidase [PATH:bpy01100]
bpy_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bpy01100]
bpy_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:bpy01100]
bpy_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bpy01100]
bpy_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:bpy01100]
bpy_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:bpy01100]
bpy_M00555  Betaine biosynthesis, choline => betaine [PATH:bpy01100]
bpy_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:bpy01100]
bpy_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:bpy01100]
bpy_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bpy01100]
bpy_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:bpy01100]
bpy_M00621  Glycine cleavage system [PATH:bpy01100]
bpy_M00793  dTDP-L-rhamnose biosynthesis [PATH:bpy01100]
bpy_M00844  Arginine biosynthesis, ornithine => arginine [PATH:bpy01100]
bpy_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bpy01100]
bpy_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:bpy01100]
bpy_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bpy01100]
bpy_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:bpy01100]
bpy_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bpy01100]
bpy_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:bpy01100]
bpy_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:bpy01100]
bpy_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:bpy01100]
bpy_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:bpy01100]
bpy_M00970  Proline degradation, proline => glutamate [PATH:bpy01100]
bpy_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:bpy01100]
Organism
Paraburkholderia phytofirmans PsJN [GN:bpy]
Related
pathway
bpy00010  Glycolysis / Gluconeogenesis
bpy00020  Citrate cycle (TCA cycle)
bpy00030  Pentose phosphate pathway
bpy00040  Pentose and glucuronate interconversions
bpy00051  Fructose and mannose metabolism
bpy00052  Galactose metabolism
bpy00053  Ascorbate and aldarate metabolism
bpy00061  Fatty acid biosynthesis
bpy00071  Fatty acid degradation
bpy00100  Steroid biosynthesis
bpy00130  Ubiquinone and other terpenoid-quinone biosynthesis
bpy00190  Oxidative phosphorylation
bpy00220  Arginine biosynthesis
bpy00230  Purine metabolism
bpy00240  Pyrimidine metabolism
bpy00250  Alanine, aspartate and glutamate metabolism
bpy00260  Glycine, serine and threonine metabolism
bpy00261  Monobactam biosynthesis
bpy00270  Cysteine and methionine metabolism
bpy00280  Valine, leucine and isoleucine degradation
bpy00290  Valine, leucine and isoleucine biosynthesis
bpy00300  Lysine biosynthesis
bpy00310  Lysine degradation
bpy00330  Arginine and proline metabolism
bpy00332  Carbapenem biosynthesis
bpy00340  Histidine metabolism
bpy00350  Tyrosine metabolism
bpy00360  Phenylalanine metabolism
bpy00361  Chlorocyclohexane and chlorobenzene degradation
bpy00362  Benzoate degradation
bpy00364  Fluorobenzoate degradation
bpy00365  Furfural degradation
bpy00380  Tryptophan metabolism
bpy00400  Phenylalanine, tyrosine and tryptophan biosynthesis
bpy00401  Novobiocin biosynthesis
bpy00410  beta-Alanine metabolism
bpy00430  Taurine and hypotaurine metabolism
bpy00440  Phosphonate and phosphinate metabolism
bpy00450  Selenocompound metabolism
bpy00460  Cyanoamino acid metabolism
bpy00470  D-Amino acid metabolism
bpy00480  Glutathione metabolism
bpy00500  Starch and sucrose metabolism
bpy00520  Amino sugar and nucleotide sugar metabolism
bpy00521  Streptomycin biosynthesis
bpy00523  Polyketide sugar unit biosynthesis
bpy00525  Acarbose and validamycin biosynthesis
bpy00540  Lipopolysaccharide biosynthesis
bpy00541  O-Antigen nucleotide sugar biosynthesis
bpy00543  Exopolysaccharide biosynthesis
bpy00550  Peptidoglycan biosynthesis
bpy00552  Teichoic acid biosynthesis
bpy00561  Glycerolipid metabolism
bpy00562  Inositol phosphate metabolism
bpy00564  Glycerophospholipid metabolism
bpy00565  Ether lipid metabolism
bpy00592  alpha-Linolenic acid metabolism
bpy00620  Pyruvate metabolism
bpy00621  Dioxin degradation
bpy00622  Xylene degradation
bpy00623  Toluene degradation
bpy00624  Polycyclic aromatic hydrocarbon degradation
bpy00625  Chloroalkane and chloroalkene degradation
bpy00626  Naphthalene degradation
bpy00627  Aminobenzoate degradation
bpy00630  Glyoxylate and dicarboxylate metabolism
bpy00633  Nitrotoluene degradation
bpy00640  Propanoate metabolism
bpy00643  Styrene degradation
bpy00650  Butanoate metabolism
bpy00660  C5-Branched dibasic acid metabolism
bpy00670  One carbon pool by folate
bpy00680  Methane metabolism
bpy00710  Carbon fixation in photosynthetic organisms
bpy00730  Thiamine metabolism
bpy00740  Riboflavin metabolism
bpy00750  Vitamin B6 metabolism
bpy00760  Nicotinate and nicotinamide metabolism
bpy00770  Pantothenate and CoA biosynthesis
bpy00780  Biotin metabolism
bpy00785  Lipoic acid metabolism
bpy00790  Folate biosynthesis
bpy00791  Atrazine degradation
bpy00860  Porphyrin metabolism
bpy00900  Terpenoid backbone biosynthesis
bpy00903  Limonene degradation
bpy00906  Carotenoid biosynthesis
bpy00907  Pinene, camphor and geraniol degradation
bpy00909  Sesquiterpenoid and triterpenoid biosynthesis
bpy00910  Nitrogen metabolism
bpy00920  Sulfur metabolism
bpy00930  Caprolactam degradation
bpy00946  Degradation of flavonoids
bpy00984  Steroid degradation
bpy00996  Biosynthesis of various alkaloids
bpy00998  Biosynthesis of various antibiotics
bpy00999  Biosynthesis of various plant secondary metabolites
bpy01040  Biosynthesis of unsaturated fatty acids
bpy01059  Biosynthesis of enediyne antibiotics
KO pathway
ko01100   
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