Entry Name ABC transporters - Bacillus subtilis subsp. spizizenii TU-B-10
Description The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class Environmental Information Processing; Membrane transportBRITE hierarchy
Pathway map Ortholog table Other DBs Organism Bacillus subtilis subsp. spizizenii TU-B-10 [GN:
bst ]
Gene GYO_1171 putative aliphatic sulfonates transport permease protein SsuC [KO:K15554 ]
GYO_3649 modA; molybdate ABC transporter, periplasmic molybdate-binding protein [KO:K02020 ]
GYO_3650 modB; molybdate ABC transporter, permease protein [KO:K02018 ]
GYO_0503 glycine betaine transport system permease protein opuAB [KO:K02001 ]
GYO_3704 glycine betaine/carnitine/choline-binding protein [KO:K05845 ]
GYO_3703 glycine betaine/carnitine/choline transport system permease proteinopuCD [KO:K05846 ]
GYO_3705 glycine betaine/carnitine/choline transport system permease proteinopuCB [KO:K05846 ]
GYO_3555 putative ABC transporter ATP-binding protein YcjV [KO:K10112 ] [EC:7.5.2.-]
GYO_4285 multiple sugar-binding transport ATP-binding protein MsmK [KO:K10112 ] [EC:7.5.2.-]
GYO_3560 putative ABC transporter extracellular-binding protein yurOprecursor [KO:K10117 ]
GYO_3124 L-arabinose transport system permease protein AraP [KO:K17235 ]
GYO_3123 L-arabinose transport system permease protein AraQ [KO:K17236 ]
GYO_2763 pstC; phosphate ABC transporter, permease protein PstC [KO:K02037 ]
GYO_2762 pstA; phosphate ABC transporter, permease protein PstA [KO:K02038 ]
GYO_0576 putative amino-acid ABC transporter extracellular-binding protein yckKprecursor [KO:K02424 ]
GYO_0575 putative amino-acid ABC transporter permease protein YckJ [KO:K10009 ]
GYO_4358 amino acid ABC transporter, periplasmic amino acid-binding portion [KO:K16961 ]
GYO_4356 putative amino-acid ABC transporter ATP-binding protein YtmN [KO:K16963 ]
GYO_2643 amino acid abc transporter, amino acid-binding protein [KO:K23059 ]
GYO_1448 oppB; oligopeptide transport system permease protein OppB [KO:K15581 ]
GYO_1449 oppC; oligopeptide transport system permease protein OppC [KO:K15582 ]
GYO_1450 oppD; oligopeptide transport ATP-binding protein OppD [KO:K15583 ]
GYO_1451 oppF; oligopeptide transport ATP-binding protein OppF [KO:K10823 ]
GYO_1015 iron(III) dicitrate transport system permease protein FecD [KO:K23182 ]
GYO_1016 ferrichrome transport system permease protein FhuB [KO:K23183 ]
GYO_3329 mntC; manganese transport system membrane protein MntC [KO:K11708 ]
GYO_0170 yveK; cobalt import ATP-binding protein CbiO 1 [KO:K16786 ] [EC:7.-.-.-]
GYO_3925 tagG; teichoic acid translocation permease protein TagG [KO:K09692 ]
GYO_4274 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC [KO:K16012 ]
GYO_4275 cydD; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD [KO:K16013 ]
Compound C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference Authors Tomii K, Kanehisa M.
Title A comparative analysis of ABC transporters in complete microbial genomes.
Journal Reference Authors Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal Reference Authors Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal Reference Authors Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal Reference Authors Quintero MJ, Montesinos ML, Herrero A, Flores E
Title Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal Reference Authors Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal Reference Authors Valladares A, Montesinos ML, Herrero A, Flores E.
Title An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal Reference Authors Richard-Fogal CL, Frawley ER, Kranz RG
Title Topology and function of CcmD in cytochrome c maturation.
Journal Reference Authors Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal Reference Authors Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal Reference Authors Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal Reference Authors Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal KO pathway LinkDB All DBs
