KEGG   PATHWAY: cdk00030
Entry
cdk00030                    Pathway                                
Name
Pentose phosphate pathway - Camelus dromedarius (Arabian camel)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
cdk00030  Pentose phosphate pathway
cdk00030

Module
cdk_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cdk00030]
cdk_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cdk00030]
cdk_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cdk00030]
cdk_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cdk00030]
Other DBs
GO: 0006098
Organism
Camelus dromedarius (Arabian camel) [GN:cdk]
Gene
105096722  GPI; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
105106602  G6PD; glucose-6-phosphate 1-dehydrogenase isoform X1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
105101850  PGLS; 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
105106995  H6PD; GDH/6PGL endoplasmic bifunctional protein isoform X1 [KO:K13937] [EC:1.1.1.47 3.1.1.31]
105107012  PGD; 6-phosphogluconate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
105093545  RPE; ribulose-phosphate 3-epimerase isoform X1 [KO:K01783] [EC:5.1.3.1]
105093204  TKT; transketolase [KO:K00615] [EC:2.2.1.1]
105098718  TKTL1; transketolase-like protein 1 [KO:K00615] [EC:2.2.1.1]
105094363  TKTL2; transketolase-like protein 2 [KO:K00615] [EC:2.2.1.1]
105105437  TALDO1; transaldolase [KO:K00616] [EC:2.2.1.2]
105104197  RPIA; ribose-5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
105095754  SHPK; sedoheptulokinase isoform X1 [KO:K11214] [EC:2.7.1.14]
105096533  DERA; deoxyribose-phosphate aldolase isoform X1 [KO:K01619] [EC:4.1.2.4]
105098559  RBKS; ribokinase isoform X1 [KO:K00852] [EC:2.7.1.15]
105107132  PGM1; phosphoglucomutase-1 isoform X1 [KO:K01835] [EC:5.4.2.2]
105106039  PGM2; phosphoglucomutase-2 isoform X1 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
105100604  PRPS2; ribose-phosphate pyrophosphokinase 2 [KO:K00948] [EC:2.7.6.1]
105095425  PRPS1; ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
105092888  PRPS1L1; ribose-phosphate pyrophosphokinase 3 isoform X1 [KO:K00948] [EC:2.7.6.1]
105101951  RGN; regucalcin isoform X2 [KO:K01053] [EC:3.1.1.17]
105100483  IDNK; probable gluconokinase isoform X1 [KO:K00851] [EC:2.7.1.12]
105093442  GLYCTK; glycerate kinase isoform X1 [KO:K11529] [EC:2.7.1.165]
105086874  ALDOB; fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
105088182  ALDOC; fructose-bisphosphate aldolase C [KO:K01623] [EC:4.1.2.13]
105102764  ALDOA; fructose-bisphosphate aldolase A [KO:K01623] [EC:4.1.2.13]
105084693  FBP1; fructose-1,6-bisphosphatase 1 isoform X2 [KO:K03841] [EC:3.1.3.11]
105084694  FBP2; fructose-1,6-bisphosphatase isozyme 2 isoform X1 [KO:K03841] [EC:3.1.3.11]
105103995  PFKL; ATP-dependent 6-phosphofructokinase, liver type isoform X1 [KO:K00850] [EC:2.7.1.11]
105103800  PFKM; ATP-dependent 6-phosphofructokinase, muscle type [KO:K00850] [EC:2.7.1.11]
105100510  PFKP; ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
cdk00010  Glycolysis / Gluconeogenesis
cdk00040  Pentose and glucuronate interconversions
cdk00052  Galactose metabolism
cdk00230  Purine metabolism
cdk00240  Pyrimidine metabolism
cdk00340  Histidine metabolism
cdk00630  Glyoxylate and dicarboxylate metabolism
cdk00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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