KEGG   PATHWAY: cdm01100
Entry
cdm01100                    Pathway                                
Name
Metabolic pathways - Cronobacter dublinensis
Class
Pathway map
cdm01100  Metabolic pathways
cdm01100

Module
cdm_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cdm01100]
cdm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cdm01100]
cdm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cdm01100]
cdm_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cdm01100]
cdm_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cdm01100]
cdm_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cdm01100]
cdm_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cdm01100]
cdm_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:cdm01100]
cdm_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:cdm01100]
cdm_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cdm01100]
cdm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cdm01100]
cdm_M00012  Glyoxylate cycle [PATH:cdm01100]
cdm_M00015  Proline biosynthesis, glutamate => proline [PATH:cdm01100]
cdm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cdm01100]
cdm_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:cdm01100]
cdm_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cdm01100]
cdm_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cdm01100]
cdm_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:cdm01100]
cdm_M00021  Cysteine biosynthesis, serine => cysteine [PATH:cdm01100]
cdm_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cdm01100]
cdm_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:cdm01100]
cdm_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:cdm01100]
cdm_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:cdm01100]
cdm_M00026  Histidine biosynthesis, PRPP => histidine [PATH:cdm01100]
cdm_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:cdm01100]
cdm_M00034  Methionine salvage pathway [PATH:cdm01100]
cdm_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cdm01100]
cdm_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cdm01100]
cdm_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cdm01100]
cdm_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:cdm01100]
cdm_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cdm01100]
cdm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cdm01100]
cdm_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:cdm01100]
cdm_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cdm01100]
cdm_M00063  CMP-KDO biosynthesis [PATH:cdm01100]
cdm_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:cdm01100]
cdm_M00082  Fatty acid biosynthesis, initiation [PATH:cdm01100]
cdm_M00083  Fatty acid biosynthesis, elongation [PATH:cdm01100]
cdm_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:cdm01100]
cdm_M00087  beta-Oxidation [PATH:cdm01100]
cdm_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cdm01100]
cdm_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:cdm01100]
cdm_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cdm01100]
cdm_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:cdm01100]
cdm_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cdm01100]
cdm_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:cdm01100]
cdm_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cdm01100]
cdm_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:cdm01100]
cdm_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cdm01100]
cdm_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cdm01100]
cdm_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:cdm01100]
cdm_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cdm01100]
cdm_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:cdm01100]
cdm_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:cdm01100]
cdm_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:cdm01100]
cdm_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:cdm01100]
cdm_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:cdm01100]
cdm_M00149  Succinate dehydrogenase, prokaryotes [PATH:cdm01100]
cdm_M00150  Fumarate reductase, prokaryotes [PATH:cdm01100]
cdm_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:cdm01100]
cdm_M00168  CAM (Crassulacean acid metabolism), dark [PATH:cdm01100]
cdm_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:cdm01100]
cdm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cdm01100]
cdm_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:cdm01100]
cdm_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:cdm01100]
cdm_M00417  Cytochrome o ubiquinol oxidase [PATH:cdm01100]
cdm_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cdm01100]
cdm_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:cdm01100]
cdm_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:cdm01100]
cdm_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cdm01100]
cdm_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:cdm01100]
cdm_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cdm01100]
cdm_M00555  Betaine biosynthesis, choline => betaine [PATH:cdm01100]
cdm_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:cdm01100]
cdm_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cdm01100]
cdm_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:cdm01100]
cdm_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:cdm01100]
cdm_M00621  Glycine cleavage system [PATH:cdm01100]
cdm_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cdm01100]
cdm_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cdm01100]
cdm_M00844  Arginine biosynthesis, ornithine => arginine [PATH:cdm01100]
cdm_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cdm01100]
cdm_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cdm01100]
cdm_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:cdm01100]
cdm_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:cdm01100]
cdm_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cdm01100]
cdm_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cdm01100]
cdm_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:cdm01100]
cdm_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cdm01100]
cdm_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:cdm01100]
cdm_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cdm01100]
cdm_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:cdm01100]
cdm_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:cdm01100]
cdm_M00970  Proline degradation, proline => glutamate [PATH:cdm01100]
Organism
Cronobacter dublinensis [GN:cdm]
Related
pathway
cdm00010  Glycolysis / Gluconeogenesis
cdm00020  Citrate cycle (TCA cycle)
cdm00030  Pentose phosphate pathway
cdm00040  Pentose and glucuronate interconversions
cdm00051  Fructose and mannose metabolism
cdm00052  Galactose metabolism
cdm00053  Ascorbate and aldarate metabolism
cdm00061  Fatty acid biosynthesis
cdm00071  Fatty acid degradation
cdm00130  Ubiquinone and other terpenoid-quinone biosynthesis
cdm00190  Oxidative phosphorylation
cdm00220  Arginine biosynthesis
cdm00230  Purine metabolism
cdm00240  Pyrimidine metabolism
cdm00250  Alanine, aspartate and glutamate metabolism
cdm00260  Glycine, serine and threonine metabolism
cdm00261  Monobactam biosynthesis
cdm00270  Cysteine and methionine metabolism
cdm00280  Valine, leucine and isoleucine degradation
cdm00290  Valine, leucine and isoleucine biosynthesis
cdm00300  Lysine biosynthesis
cdm00310  Lysine degradation
cdm00330  Arginine and proline metabolism
cdm00332  Carbapenem biosynthesis
cdm00340  Histidine metabolism
cdm00350  Tyrosine metabolism
cdm00360  Phenylalanine metabolism
cdm00361  Chlorocyclohexane and chlorobenzene degradation
cdm00362  Benzoate degradation
cdm00364  Fluorobenzoate degradation
cdm00380  Tryptophan metabolism
cdm00400  Phenylalanine, tyrosine and tryptophan biosynthesis
cdm00401  Novobiocin biosynthesis
cdm00410  beta-Alanine metabolism
cdm00430  Taurine and hypotaurine metabolism
cdm00440  Phosphonate and phosphinate metabolism
cdm00450  Selenocompound metabolism
cdm00460  Cyanoamino acid metabolism
cdm00470  D-Amino acid metabolism
cdm00480  Glutathione metabolism
cdm00500  Starch and sucrose metabolism
cdm00511  Other glycan degradation
cdm00520  Amino sugar and nucleotide sugar metabolism
cdm00521  Streptomycin biosynthesis
cdm00523  Polyketide sugar unit biosynthesis
cdm00525  Acarbose and validamycin biosynthesis
cdm00540  Lipopolysaccharide biosynthesis
cdm00541  O-Antigen nucleotide sugar biosynthesis
cdm00542  O-Antigen repeat unit biosynthesis
cdm00543  Exopolysaccharide biosynthesis
cdm00550  Peptidoglycan biosynthesis
cdm00552  Teichoic acid biosynthesis
cdm00561  Glycerolipid metabolism
cdm00562  Inositol phosphate metabolism
cdm00564  Glycerophospholipid metabolism
cdm00565  Ether lipid metabolism
cdm00591  Linoleic acid metabolism
cdm00592  alpha-Linolenic acid metabolism
cdm00600  Sphingolipid metabolism
cdm00620  Pyruvate metabolism
cdm00623  Toluene degradation
cdm00625  Chloroalkane and chloroalkene degradation
cdm00626  Naphthalene degradation
cdm00627  Aminobenzoate degradation
cdm00630  Glyoxylate and dicarboxylate metabolism
cdm00633  Nitrotoluene degradation
cdm00640  Propanoate metabolism
cdm00650  Butanoate metabolism
cdm00660  C5-Branched dibasic acid metabolism
cdm00670  One carbon pool by folate
cdm00680  Methane metabolism
cdm00710  Carbon fixation by Calvin cycle
cdm00720  Other carbon fixation pathways
cdm00730  Thiamine metabolism
cdm00740  Riboflavin metabolism
cdm00750  Vitamin B6 metabolism
cdm00760  Nicotinate and nicotinamide metabolism
cdm00770  Pantothenate and CoA biosynthesis
cdm00780  Biotin metabolism
cdm00785  Lipoic acid metabolism
cdm00790  Folate biosynthesis
cdm00791  Atrazine degradation
cdm00860  Porphyrin metabolism
cdm00900  Terpenoid backbone biosynthesis
cdm00906  Carotenoid biosynthesis
cdm00907  Pinene, camphor and geraniol degradation
cdm00910  Nitrogen metabolism
cdm00920  Sulfur metabolism
cdm00930  Caprolactam degradation
cdm00946  Degradation of flavonoids
cdm00997  Biosynthesis of various other secondary metabolites
cdm00999  Biosynthesis of various plant secondary metabolites
cdm01040  Biosynthesis of unsaturated fatty acids
cdm01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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