KEGG   PATHWAY: cir01100
Entry
cir01100                    Pathway                                
Name
Metabolic pathways - Citrobacter sp. CFNIH10
Class
Pathway map
cir01100  Metabolic pathways
cir01100

Module
cir_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cir01100]
cir_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cir01100]
cir_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cir01100]
cir_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cir01100]
cir_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cir01100]
cir_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cir01100]
cir_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cir01100]
cir_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:cir01100]
cir_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:cir01100]
cir_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cir01100]
cir_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cir01100]
cir_M00012  Glyoxylate cycle [PATH:cir01100]
cir_M00015  Proline biosynthesis, glutamate => proline [PATH:cir01100]
cir_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cir01100]
cir_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:cir01100]
cir_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cir01100]
cir_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cir01100]
cir_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:cir01100]
cir_M00021  Cysteine biosynthesis, serine => cysteine [PATH:cir01100]
cir_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cir01100]
cir_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:cir01100]
cir_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:cir01100]
cir_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:cir01100]
cir_M00026  Histidine biosynthesis, PRPP => histidine [PATH:cir01100]
cir_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:cir01100]
cir_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:cir01100]
cir_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cir01100]
cir_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cir01100]
cir_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cir01100]
cir_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:cir01100]
cir_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cir01100]
cir_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cir01100]
cir_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:cir01100]
cir_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cir01100]
cir_M00063  CMP-KDO biosynthesis [PATH:cir01100]
cir_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:cir01100]
cir_M00082  Fatty acid biosynthesis, initiation [PATH:cir01100]
cir_M00083  Fatty acid biosynthesis, elongation [PATH:cir01100]
cir_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:cir01100]
cir_M00087  beta-Oxidation [PATH:cir01100]
cir_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cir01100]
cir_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:cir01100]
cir_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cir01100]
cir_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:cir01100]
cir_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cir01100]
cir_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:cir01100]
cir_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cir01100]
cir_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:cir01100]
cir_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cir01100]
cir_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:cir01100]
cir_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cir01100]
cir_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:cir01100]
cir_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cir01100]
cir_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:cir01100]
cir_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:cir01100]
cir_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:cir01100]
cir_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:cir01100]
cir_M00149  Succinate dehydrogenase, prokaryotes [PATH:cir01100]
cir_M00150  Fumarate reductase, prokaryotes [PATH:cir01100]
cir_M00151  Cytochrome bc1 complex respiratory unit [PATH:cir01100]
cir_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:cir01100]
cir_M00168  CAM (Crassulacean acid metabolism), dark [PATH:cir01100]
cir_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:cir01100]
cir_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cir01100]
cir_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:cir01100]
cir_M00417  Cytochrome o ubiquinol oxidase [PATH:cir01100]
cir_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cir01100]
cir_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:cir01100]
cir_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cir01100]
cir_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:cir01100]
cir_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:cir01100]
cir_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cir01100]
cir_M00555  Betaine biosynthesis, choline => betaine [PATH:cir01100]
cir_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:cir01100]
cir_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cir01100]
cir_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:cir01100]
cir_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:cir01100]
cir_M00621  Glycine cleavage system [PATH:cir01100]
cir_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cir01100]
cir_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cir01100]
cir_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:cir01100]
cir_M00844  Arginine biosynthesis, ornithine => arginine [PATH:cir01100]
cir_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cir01100]
cir_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cir01100]
cir_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:cir01100]
cir_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:cir01100]
cir_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cir01100]
cir_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cir01100]
cir_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:cir01100]
cir_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cir01100]
cir_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:cir01100]
cir_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cir01100]
cir_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:cir01100]
cir_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:cir01100]
cir_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:cir01100]
cir_M00970  Proline degradation, proline => glutamate [PATH:cir01100]
Organism
Citrobacter sp. CFNIH10 [GN:cir]
Related
pathway
cir00010  Glycolysis / Gluconeogenesis
cir00020  Citrate cycle (TCA cycle)
cir00030  Pentose phosphate pathway
cir00040  Pentose and glucuronate interconversions
cir00051  Fructose and mannose metabolism
cir00052  Galactose metabolism
cir00053  Ascorbate and aldarate metabolism
cir00061  Fatty acid biosynthesis
cir00071  Fatty acid degradation
cir00130  Ubiquinone and other terpenoid-quinone biosynthesis
cir00190  Oxidative phosphorylation
cir00220  Arginine biosynthesis
cir00230  Purine metabolism
cir00240  Pyrimidine metabolism
cir00250  Alanine, aspartate and glutamate metabolism
cir00260  Glycine, serine and threonine metabolism
cir00261  Monobactam biosynthesis
cir00270  Cysteine and methionine metabolism
cir00280  Valine, leucine and isoleucine degradation
cir00290  Valine, leucine and isoleucine biosynthesis
cir00300  Lysine biosynthesis
cir00310  Lysine degradation
cir00330  Arginine and proline metabolism
cir00332  Carbapenem biosynthesis
cir00340  Histidine metabolism
cir00350  Tyrosine metabolism
cir00360  Phenylalanine metabolism
cir00361  Chlorocyclohexane and chlorobenzene degradation
cir00362  Benzoate degradation
cir00364  Fluorobenzoate degradation
cir00380  Tryptophan metabolism
cir00400  Phenylalanine, tyrosine and tryptophan biosynthesis
cir00401  Novobiocin biosynthesis
cir00410  beta-Alanine metabolism
cir00430  Taurine and hypotaurine metabolism
cir00440  Phosphonate and phosphinate metabolism
cir00450  Selenocompound metabolism
cir00460  Cyanoamino acid metabolism
cir00470  D-Amino acid metabolism
cir00480  Glutathione metabolism
cir00500  Starch and sucrose metabolism
cir00511  Other glycan degradation
cir00520  Amino sugar and nucleotide sugar metabolism
cir00521  Streptomycin biosynthesis
cir00523  Polyketide sugar unit biosynthesis
cir00525  Acarbose and validamycin biosynthesis
cir00540  Lipopolysaccharide biosynthesis
cir00541  O-Antigen nucleotide sugar biosynthesis
cir00542  O-Antigen repeat unit biosynthesis
cir00543  Exopolysaccharide biosynthesis
cir00550  Peptidoglycan biosynthesis
cir00552  Teichoic acid biosynthesis
cir00561  Glycerolipid metabolism
cir00562  Inositol phosphate metabolism
cir00564  Glycerophospholipid metabolism
cir00565  Ether lipid metabolism
cir00592  alpha-Linolenic acid metabolism
cir00620  Pyruvate metabolism
cir00622  Xylene degradation
cir00623  Toluene degradation
cir00625  Chloroalkane and chloroalkene degradation
cir00626  Naphthalene degradation
cir00627  Aminobenzoate degradation
cir00630  Glyoxylate and dicarboxylate metabolism
cir00633  Nitrotoluene degradation
cir00640  Propanoate metabolism
cir00650  Butanoate metabolism
cir00660  C5-Branched dibasic acid metabolism
cir00670  One carbon pool by folate
cir00680  Methane metabolism
cir00710  Carbon fixation by Calvin cycle
cir00720  Other carbon fixation pathways
cir00730  Thiamine metabolism
cir00740  Riboflavin metabolism
cir00750  Vitamin B6 metabolism
cir00760  Nicotinate and nicotinamide metabolism
cir00770  Pantothenate and CoA biosynthesis
cir00780  Biotin metabolism
cir00785  Lipoic acid metabolism
cir00790  Folate biosynthesis
cir00860  Porphyrin metabolism
cir00900  Terpenoid backbone biosynthesis
cir00903  Limonene degradation
cir00907  Pinene, camphor and geraniol degradation
cir00910  Nitrogen metabolism
cir00920  Sulfur metabolism
cir00930  Caprolactam degradation
cir00946  Degradation of flavonoids
cir00999  Biosynthesis of various plant secondary metabolites
cir01040  Biosynthesis of unsaturated fatty acids
cir01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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