PATHWAY: citz01100 Help Entry citz01100                   Pathway                                 Name Metabolic pathways - Citrobacter tructae Class BRITE hierarchy Pathway map citz01100   Metabolic pathways Module citz_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:citz01100] citz_M00002   Glycolysis, core module involving three-carbon compounds [PATH:citz01100] citz_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:citz01100] citz_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:citz01100] citz_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:citz01100] citz_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:citz01100] citz_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:citz01100] citz_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:citz01100] citz_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:citz01100] citz_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:citz01100] citz_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:citz01100] citz_M00012   Glyoxylate cycle [PATH:citz01100] citz_M00015   Proline biosynthesis, glutamate => proline [PATH:citz01100] citz_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:citz01100] citz_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:citz01100] citz_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:citz01100] citz_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:citz01100] citz_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:citz01100] citz_M00021   Cysteine biosynthesis, serine => cysteine [PATH:citz01100] citz_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:citz01100] citz_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:citz01100] citz_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:citz01100] citz_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:citz01100] citz_M00026   Histidine biosynthesis, PRPP => histidine [PATH:citz01100] citz_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:citz01100] citz_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:citz01100] citz_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:citz01100] citz_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:citz01100] citz_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:citz01100] citz_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:citz01100] citz_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:citz01100] citz_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:citz01100] citz_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:citz01100] citz_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:citz01100] citz_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:citz01100] citz_M00063   CMP-KDO biosynthesis [PATH:citz01100] citz_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:citz01100] citz_M00082   Fatty acid biosynthesis, initiation [PATH:citz01100] citz_M00083   Fatty acid biosynthesis, elongation [PATH:citz01100] citz_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:citz01100] citz_M00087   beta-Oxidation [PATH:citz01100] citz_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:citz01100] citz_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:citz01100] citz_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:citz01100] citz_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:citz01100] citz_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:citz01100] citz_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:citz01100] citz_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:citz01100] citz_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:citz01100] citz_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:citz01100] citz_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:citz01100] citz_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:citz01100] citz_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:citz01100] citz_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:citz01100] citz_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:citz01100] citz_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:citz01100] citz_M00136   GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:citz01100] citz_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:citz01100] citz_M00149   Succinate dehydrogenase, prokaryotes [PATH:citz01100] citz_M00150   Fumarate reductase, prokaryotes [PATH:citz01100] citz_M00151   Cytochrome bc1 complex respiratory unit [PATH:citz01100] citz_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:citz01100] citz_M00168   CAM (Crassulacean acid metabolism), dark [PATH:citz01100] citz_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:citz01100] citz_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:citz01100] citz_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:citz01100] citz_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:citz01100] citz_M00417   Cytochrome o ubiquinol oxidase [PATH:citz01100] citz_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:citz01100] citz_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:citz01100] citz_M00545   Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:citz01100] citz_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:citz01100] citz_M00550   Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:citz01100] citz_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:citz01100] citz_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:citz01100] citz_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:citz01100] citz_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:citz01100] citz_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:citz01100] citz_M00580   Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:citz01100] citz_M00621   Glycine cleavage system [PATH:citz01100] citz_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:citz01100] citz_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:citz01100] citz_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:citz01100] citz_M00844   Arginine biosynthesis, ornithine => arginine [PATH:citz01100] citz_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:citz01100] citz_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:citz01100] citz_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:citz01100] citz_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:citz01100] citz_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:citz01100] citz_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:citz01100] citz_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:citz01100] citz_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:citz01100] citz_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:citz01100] citz_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:citz01100] citz_M00956   Lysine degradation, bacteria, L-lysine => succinate [PATH:citz01100] citz_M00970   Proline degradation, proline => glutamate [PATH:citz01100] Organism Citrobacter tructae [GN:citz] Related pathway citz00010   Glycolysis / Gluconeogenesis citz00020   Citrate cycle (TCA cycle) citz00030   Pentose phosphate pathway citz00040   Pentose and glucuronate interconversions citz00051   Fructose and mannose metabolism citz00052   Galactose metabolism citz00053   Ascorbate and aldarate metabolism citz00061   Fatty acid biosynthesis citz00071   Fatty acid degradation citz00074   Mycolic acid biosynthesis citz00130   Ubiquinone and other terpenoid-quinone biosynthesis citz00190   Oxidative phosphorylation citz00220   Arginine biosynthesis citz00230   Purine metabolism citz00240   Pyrimidine metabolism citz00250   Alanine, aspartate and glutamate metabolism citz00260   Glycine, serine and threonine metabolism citz00261   Monobactam biosynthesis citz00270   Cysteine and methionine metabolism citz00280   Valine, leucine and isoleucine degradation citz00290   Valine, leucine and isoleucine biosynthesis citz00300   Lysine biosynthesis citz00310   Lysine degradation citz00330   Arginine and proline metabolism citz00332   Carbapenem biosynthesis citz00340   Histidine metabolism citz00350   Tyrosine metabolism citz00360   Phenylalanine metabolism citz00361   Chlorocyclohexane and chlorobenzene degradation citz00362   Benzoate degradation citz00364   Fluorobenzoate degradation citz00380   Tryptophan metabolism citz00400   Phenylalanine, tyrosine and tryptophan biosynthesis citz00401   Novobiocin biosynthesis citz00410   beta-Alanine metabolism citz00430   Taurine and hypotaurine metabolism citz00440   Phosphonate and phosphinate metabolism citz00450   Selenocompound metabolism citz00460   Cyanoamino acid metabolism citz00470   D-Amino acid metabolism citz00480   Glutathione metabolism citz00500   Starch and sucrose metabolism citz00511   Other glycan degradation citz00520   Amino sugar and nucleotide sugar metabolism citz00521   Streptomycin biosynthesis citz00523   Polyketide sugar unit biosynthesis citz00525   Acarbose and validamycin biosynthesis citz00540   Lipopolysaccharide biosynthesis citz00541   O-Antigen nucleotide sugar biosynthesis citz00542   O-Antigen repeat unit biosynthesis citz00543   Exopolysaccharide biosynthesis citz00550   Peptidoglycan biosynthesis citz00552   Teichoic acid biosynthesis citz00561   Glycerolipid metabolism citz00562   Inositol phosphate metabolism citz00564   Glycerophospholipid metabolism citz00565   Ether lipid metabolism citz00592   alpha-Linolenic acid metabolism citz00600   Sphingolipid metabolism citz00620   Pyruvate metabolism citz00621   Dioxin degradation citz00622   Xylene degradation citz00623   Toluene degradation citz00625   Chloroalkane and chloroalkene degradation citz00626   Naphthalene degradation citz00627   Aminobenzoate degradation citz00630   Glyoxylate and dicarboxylate metabolism citz00633   Nitrotoluene degradation citz00640   Propanoate metabolism citz00650   Butanoate metabolism citz00660   C5-Branched dibasic acid metabolism citz00670   One carbon pool by folate citz00680   Methane metabolism citz00710   Carbon fixation by Calvin cycle citz00720   Other carbon fixation pathways citz00730   Thiamine metabolism citz00740   Riboflavin metabolism citz00750   Vitamin B6 metabolism citz00760   Nicotinate and nicotinamide metabolism citz00770   Pantothenate and CoA biosynthesis citz00780   Biotin metabolism citz00785   Lipoic acid metabolism citz00790   Folate biosynthesis citz00860   Porphyrin metabolism citz00900   Terpenoid backbone biosynthesis citz00907   Pinene, camphor and geraniol degradation citz00910   Nitrogen metabolism citz00920   Sulfur metabolism citz00930   Caprolactam degradation citz00946   Degradation of flavonoids citz00999   Biosynthesis of various plant secondary metabolites citz01040   Biosynthesis of unsaturated fatty acids citz01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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