KEGG   PATHWAY: cmo00940
Entry
cmo00940                    Pathway                                
Name
Phenylpropanoid biosynthesis - Cucumis melo (muskmelon)
Description
Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.
Class
Metabolism; Biosynthesis of other secondary metabolites
Pathway map
cmo00940  Phenylpropanoid biosynthesis
cmo00940

Module
cmo_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:cmo00940]
cmo_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:cmo00940]
Other DBs
GO: 0009699
Organism
Cucumis melo (muskmelon) [GN:cmo]
Gene
103491170  phenylalanine ammonia-lyase-like [KO:K10775] [EC:4.3.1.24]
103492351  phenylalanine ammonia-lyase-like [KO:K10775] [EC:4.3.1.24]
103494630  phenylalanine ammonia-lyase-like [KO:K10775] [EC:4.3.1.24]
103494628  phenylalanine ammonia-lyase-like [KO:K10775] [EC:4.3.1.24]
103494629  phenylalanine ammonia-lyase-like [KO:K10775] [EC:4.3.1.24]
103496433  phenylalanine ammonia-lyase G4 isoform X1 [KO:K10775] [EC:4.3.1.24]
103491177  phenylalanine ammonia-lyase 1-like [KO:K10775] [EC:4.3.1.24]
103491176  phenylalanine ammonia-lyase-like [KO:K10775] [EC:4.3.1.24]
103491171  phenylalanine ammonia-lyase-like [KO:K10775] [EC:4.3.1.24]
103491172  phenylalanine ammonia-lyase-like [KO:K10775] [EC:4.3.1.24]
103491175  phenylalanine ammonia-lyase [KO:K10775] [EC:4.3.1.24]
103501962  phenylalanine ammonia-lyase [KO:K10775] [EC:4.3.1.24]
103496249  trans-cinnamate 4-monooxygenase [KO:K00487] [EC:1.14.14.91]
103492214  cytochrome P450 CYP73A100-like [KO:K00487] [EC:1.14.14.91]
103492222  cytochrome P450 CYP73A100-like [KO:K00487] [EC:1.14.14.91]
103492250  cytochrome P450 CYP73A100-like [KO:K00487] [EC:1.14.14.91]
103497013  trans-cinnamate 4-monooxygenase-like isoform X1 [KO:K00487] [EC:1.14.14.91]
103486502  probable CoA ligase CCL10 [KO:K01904] [EC:6.2.1.12]
103501298  probable CoA ligase CCL7 [KO:K01904] [EC:6.2.1.12]
103488874  4-coumarate--CoA ligase-like 1 [KO:K01904] [EC:6.2.1.12]
103493360  4-coumarate--CoA ligase CCL1-like [KO:K01904] [EC:6.2.1.12]
103494274  4-coumarate--CoA ligase 1-like isoform X1 [KO:K01904] [EC:6.2.1.12]
103499867  4-coumarate--CoA ligase 1-like [KO:K01904] [EC:6.2.1.12]
103499870  4-coumarate--CoA ligase 2-like [KO:K01904] [EC:6.2.1.12]
103499868  4-coumarate--CoA ligase 2-like [KO:K01904] [EC:6.2.1.12]
103501067  4-coumarate--CoA ligase 2 [KO:K01904] [EC:6.2.1.12]
103501216  4-coumarate--CoA ligase 1-like [KO:K01904] [EC:6.2.1.12]
103499264  4-coumarate--CoA ligase-like 6 [KO:K01904] [EC:6.2.1.12]
107990308  4-coumarate--CoA ligase-like 9 [KO:K01904] [EC:6.2.1.12]
103489008  4-coumarate--CoA ligase-like 9 [KO:K01904] [EC:6.2.1.12]
103494519  salutaridinol 7-O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
103485990  spermidine hydroxycinnamoyl transferase-like [KO:K13065] [EC:2.3.1.133]
103487746  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
103488922  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
103488921  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
103488534  stemmadenine O-acetyltransferase-like [KO:K13065] [EC:2.3.1.133]
103504176  shikimate O-hydroxycinnamoyltransferase [KO:K13065] [EC:2.3.1.133]
103486874  cytochrome P450 98A2 [KO:K09754] [EC:1.14.14.96]
103494767  caffeoylshikimate esterase isoform X1 [KO:K18368] [EC:3.1.1.-]
103489918  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
103485032  caffeoylshikimate esterase-like [KO:K18368] [EC:3.1.1.-]
103498599  caffeoylshikimate esterase isoform X1 [KO:K18368] [EC:3.1.1.-]
103503381  caffeoylshikimate esterase [KO:K18368] [EC:3.1.1.-]
103488897  putative caffeoyl-CoA O-methyltransferase At1g67980 [KO:K00588] [EC:2.1.1.104]
103495237  caffeoyl-CoA O-methyltransferase 5 [KO:K00588] [EC:2.1.1.104]
103499837  cinnamoyl-CoA reductase 1-like [KO:K09753] [EC:1.2.1.44]
103500289  cinnamoyl-CoA reductase 1-like isoform X1 [KO:K09753] [EC:1.2.1.44]
103502823  cinnamoyl-CoA reductase 1-like [KO:K09753] [EC:1.2.1.44]
103502824  cinnamoyl-CoA reductase 1-like isoform X1 [KO:K09753] [EC:1.2.1.44]
103501546  aldehyde dehydrogenase family 2 member C4 [KO:K12355] [EC:1.2.1.68]
103490415  cytochrome P450 84A1-like [KO:K09755] [EC:1.14.-.-]
103485107  cytochrome P450 84A1-like [KO:K09755] [EC:1.14.-.-]
103501180  caffeic acid 3-O-methyltransferase 1 [KO:K13066] [EC:2.1.1.68 2.1.1.4]
107990280  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
103491014  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
103503246  caffeic acid 3-O-methyltransferase-like [KO:K13066] [EC:2.1.1.68 2.1.1.4]
103482886  probable cinnamyl alcohol dehydrogenase 1 [KO:K00083] [EC:1.1.1.195]
103496188  cinnamyl alcohol dehydrogenase 1-like [KO:K00083] [EC:1.1.1.195]
103503861  probable cinnamyl alcohol dehydrogenase 6 [KO:K00083] [EC:1.1.1.195]
103499659  probable mannitol dehydrogenase [KO:K00083] [EC:1.1.1.195]
103499660  probable cinnamyl alcohol dehydrogenase 9 [KO:K00083] [EC:1.1.1.195]
103495276  cinnamyl alcohol dehydrogenase 1-like [KO:K00083] [EC:1.1.1.195]
103484298  berberine bridge enzyme-like 15 [KO:K22395] [EC:1.1.1.195]
103488583  berberine bridge enzyme-like 13 [KO:K22395] [EC:1.1.1.195]
103483915  1-Cys peroxiredoxin [KO:K11188] [EC:1.11.1.7 1.11.1.27 3.1.1.-]
103501868  peroxidase 4-like [KO:K00430] [EC:1.11.1.7]
103501871  cationic peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
103491562  peroxidase 2-like precursor [KO:K00430] [EC:1.11.1.7]
103499987  peroxidase 5-like [KO:K00430] [EC:1.11.1.7]
103499988  peroxidase 5-like [KO:K00430] [EC:1.11.1.7]
103500036  peroxidase 5-like [KO:K00430] [EC:1.11.1.7]
103500038  peroxidase 5-like [KO:K00430] [EC:1.11.1.7]
103504289  peroxidase 5-like [KO:K00430] [EC:1.11.1.7]
103503509  peroxidase 20 [KO:K00430] [EC:1.11.1.7]
103504016  peroxidase 45-like [KO:K00430] [EC:1.11.1.7]
103502954  peroxidase 4-like [KO:K00430] [EC:1.11.1.7]
103499869  peroxidase 60 [KO:K00430] [EC:1.11.1.7]
103484034  peroxidase 66 [KO:K00430] [EC:1.11.1.7]
103486702  peroxidase 19 [KO:K00430] [EC:1.11.1.7]
103491521  peroxidase 47 [KO:K00430] [EC:1.11.1.7]
103504705  peroxidase 2-like isoform X1 [KO:K00430] [EC:1.11.1.7]
103483295  peroxidase 41-like [KO:K00430] [EC:1.11.1.7]
103484738  peroxidase 7 [KO:K00430] [EC:1.11.1.7]
103485311  peroxidase 42 isoform X1 [KO:K00430] [EC:1.11.1.7]
103495496  peroxidase P7-like [KO:K00430] [EC:1.11.1.7]
103495941  peroxidase 39 [KO:K00430] [EC:1.11.1.7]
103496270  peroxidase 7-like [KO:K00430] [EC:1.11.1.7]
103491561  peroxidase 2-like [KO:K00430] [EC:1.11.1.7]
103493727  peroxidase 18 [KO:K00430] [EC:1.11.1.7]
103494427  peroxidase 17 [KO:K00430] [EC:1.11.1.7]
103495682  peroxidase N1-like isoform X1 [KO:K00430] [EC:1.11.1.7]
103495580  peroxidase 27-like [KO:K00430] [EC:1.11.1.7]
103488570  peroxidase 64-like [KO:K00430] [EC:1.11.1.7]
103485477  peroxidase 55-like [KO:K00430] [EC:1.11.1.7]
103485091  peroxidase 49 [KO:K00430] [EC:1.11.1.7]
103491198  peroxidase 21-like [KO:K00430] [EC:1.11.1.7]
103491563  peroxidase 2 [KO:K00430] [EC:1.11.1.7]
103492298  peroxidase P7-like [KO:K00430] [EC:1.11.1.7]
103493217  peroxidase 72-like [KO:K00430] [EC:1.11.1.7]
103491555  LOW QUALITY PROTEIN: peroxidase 2-like [KO:K00430] [EC:1.11.1.7]
103491556  peroxidase 2-like [KO:K00430] [EC:1.11.1.7]
103491557  peroxidase 2-like [KO:K00430] [EC:1.11.1.7]
103491558  peroxidase 2-like [KO:K00430] [EC:1.11.1.7]
103491560  peroxidase 2-like [KO:K00430] [EC:1.11.1.7]
103496606  peroxidase P7 [KO:K00430] [EC:1.11.1.7]
103497358  peroxidase 51-like [KO:K00430] [EC:1.11.1.7]
103486471  peroxidase 21-like [KO:K00430] [EC:1.11.1.7]
103498017  peroxidase 5-like [KO:K00430] [EC:1.11.1.7]
103497894  peroxidase 24 [KO:K00430] [EC:1.11.1.7]
103484763  peroxidase 10 isoform X2 [KO:K00430] [EC:1.11.1.7]
103485158  peroxidase 64-like [KO:K00430] [EC:1.11.1.7]
103485480  peroxidase 51-like [KO:K00430] [EC:1.11.1.7]
103485476  peroxidase 51-like [KO:K00430] [EC:1.11.1.7]
103495437  peroxidase N1-like [KO:K00430] [EC:1.11.1.7]
103495454  peroxidase 43 [KO:K00430] [EC:1.11.1.7]
103485478  peroxidase 51-like [KO:K00430] [EC:1.11.1.7]
103493936  peroxidase 41-like [KO:K00430] [EC:1.11.1.7]
103497031  cationic peroxidase 1-like [KO:K00430] [EC:1.11.1.7]
103487453  peroxidase 25-like [KO:K00430] [EC:1.11.1.7]
103487451  peroxidase 25-like [KO:K00430] [EC:1.11.1.7]
103491554  peroxidase N [KO:K00430] [EC:1.11.1.7]
103491564  peroxidase 2-like [KO:K00430] [EC:1.11.1.7]
103497778  peroxidase 40 [KO:K00430] [EC:1.11.1.7]
103487055  peroxidase 31 [KO:K00430] [EC:1.11.1.7]
103484837  peroxidase 73-like [KO:K00430] [EC:1.11.1.7]
103489214  peroxidase 11 [KO:K00430] [EC:1.11.1.7]
103489553  peroxidase 57-like [KO:K00430] [EC:1.11.1.7]
103498407  peroxidase 10-like [KO:K00430] [EC:1.11.1.7]
103498963  probable peroxidase 61 [KO:K00430] [EC:1.11.1.7]
103499118  lignin-forming anionic peroxidase-like [KO:K00430] [EC:1.11.1.7]
103498048  peroxidase 31-like [KO:K00430] [EC:1.11.1.7]
103489638  putative Peroxidase 48 [KO:K00430] [EC:1.11.1.7]
107991803  peroxidase 5-like [KO:K00430] [EC:1.11.1.7]
103494390  anthocyanidin 3-O-glucosyltransferase 5 [KO:K12356] [EC:2.4.1.111]
103485347  UDP-glycosyltransferase 72E1 [KO:K12356] [EC:2.4.1.111]
Compound
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00223  p-Coumaroyl-CoA
C00315  Spermidine
C00323  Caffeoyl-CoA
C00406  Feruloyl-CoA
C00411  Sinapoyl-CoA
C00423  trans-Cinnamate
C00482  Sinapate
C00540  Cinnamoyl-CoA
C00590  Coniferyl alcohol
C00761  Coniferin
C00811  4-Coumarate
C00852  Chlorogenate
C00903  Cinnamaldehyde
C00933  Sinapine
C01175  1-O-Sinapoyl-beta-D-glucose
C01197  Caffeate
C01494  Ferulate
C01533  Syringin
C02325  Sinapyl alcohol
C02646  4-Coumaryl alcohol
C02666  Coniferyl aldehyde
C02887  Sinapoyl malate
C02947  4-Coumaroylshikimate
C04366  3-(2-Carboxyethenyl)-cis,cis-muconate
C05608  4-Hydroxycinnamyl aldehyde
C05610  Sinapoyl aldehyde
C05619  5-Hydroxyferulic acid
C05627  4-Hydroxystyrene
C05855  4-Hydroxycinnamyl alcohol 4-D-glucoside
C06224  3,4-Dihydroxystyrene
C10428  Anethole
C10434  5-O-Caffeoylshikimic acid
C10452  Estragole
C10453  Eugenol
C10454  Methyleugenol
C10469  Isoeugenol
C10478  Methylisoeugenol
C10945  Caffeic aldehyde
C12203  5-Hydroxyferuloyl-CoA
C12204  5-Hydroxyconiferaldehyde
C12205  5-Hydroxyconiferyl alcohol
C12206  Caffeyl alcohol
C12208  p-Coumaroyl quinic acid
C15804  p-Hydroxyphenyl lignin
C15805  Guaiacyl lignin
C15806  Syringyl lignin
C15807  5-Hydroxy-guaiacyl lignin
C16930  Chavicol
C18069  N1,N5,N10-Tricoumaroyl spermidine
C18070  N1,N5,N10-Tricaffeoyl spermidine
C18071  N1,N5,N10-Triferuloyl spermidine
C18072  N1,N5,N10-Tri(hydroxyferuloyl) spermidine
C18073  N1,N5-Di(hydroxyferuloyl)-N10-sinapoyl spermidine
C20225  Coniferyl acetate
C20464  Isochavicol
C20465  Coumaryl acetate
Reference
  Authors
Nair RB, Bastress KL, Ruegger MO, Denault JW, Chapple C.
  Title
The Arabidopsis thaliana REDUCED EPIDERMAL FLUORESCENCE1 gene encodes an aldehyde dehydrogenase involved in ferulic acid and sinapic acid biosynthesis.
  Journal
Plant Cell 16:544-54 (2004)
DOI:10.1105/tpc.017509
Reference
  Authors
Baucher M, Halpin C, Petit-Conil M, Boerjan W.
  Title
Lignin: genetic engineering and impact on pulping.
  Journal
Crit Rev Biochem Mol Biol 38:305-50 (2003)
DOI:10.1080/10409230391036757
Reference
  Authors
Rogers LA, Dubos C, Cullis IF, Surman C, Poole M, Willment J, Mansfield SD, Campbell MM.
  Title
Light, the circadian clock, and sugar perception in the control of lignin biosynthesis.
  Journal
J Exp Bot 56:1651-63 (2005)
DOI:10.1093/jxb/eri162
Reference
  Authors
Whetten R, Sederoff R.
  Title
Lignin Biosynthesis.
  Journal
Plant Cell 7:1001-1013 (1995)
DOI:10.1105/tpc.7.7.1001
Reference
PMID:8972602
  Authors
Lorenzen M, Racicot V, Strack D, Chapple C.
  Title
Sinapic acid ester metabolism in wild type and a sinapoylglucose-accumulating mutant of arabidopsis.
  Journal
Plant Physiol 112:1625-30 (1996)
DOI:10.1104/pp.112.4.1625
Reference
PMID:1477555
  Authors
Chapple CC, Vogt T, Ellis BE, Somerville CR.
  Title
An Arabidopsis mutant defective in the general phenylpropanoid pathway.
  Journal
Plant Cell 4:1413-24 (1992)
DOI:10.1105/tpc.4.11.1413
Reference
  Authors
Raes J, Rohde A, Christensen JH, Van de Peer Y, Boerjan W.
  Title
Genome-wide characterization of the lignification toolbox in Arabidopsis.
  Journal
Plant Physiol 133:1051-71 (2003)
DOI:10.1104/pp.103.026484
Reference
  Authors
Costa MA, Collins RE, Anterola AM, Cochrane FC, Davin LB, Lewis NG.
  Title
An in silico assessment of gene function and organization of the phenylpropanoid pathway metabolic networks in Arabidopsis thaliana and limitations thereof.
  Journal
Phytochemistry 64:1097-112 (2003)
DOI:10.1016/S0031-9422(03)00517-X
Reference
  Authors
Meyermans H, Morreel K, Lapierre C, Pollet B, De Bruyn A, Busson R, Herdewijn P, Devreese B, Van Beeumen J, Marita JM, Ralph J, Chen C, Burggraeve B, Van Montagu M, Messens E, Boerjan W.
  Title
Modifications in lignin and accumulation of phenolic glucosides in poplar xylem upon down-regulation of caffeoyl-coenzyme A O-methyltransferase, an enzyme involved in lignin biosynthesis.
  Journal
J Biol Chem 275:36899-909 (2000)
DOI:10.1074/jbc.M006915200
Reference
  Authors
Gachon CM, Langlois-Meurinne M, Henry Y, Saindrenan P.
  Title
Transcriptional co-regulation of secondary metabolism enzymes in Arabidopsis: functional and evolutionary implications.
  Journal
Plant Mol Biol 58:229-45 (2005)
DOI:10.1007/s11103-005-5346-5
Reference
  Authors
Li L, Popko JL, Umezawa T, Chiang VL.
  Title
5-hydroxyconiferyl aldehyde modulates enzymatic methylation for syringyl monolignol formation, a new view of monolignol biosynthesis in angiosperms.
  Journal
J Biol Chem 275:6537-45 (2000)
DOI:10.1074/jbc.275.9.6537
Reference
  Authors
Yamauchi K, Yasuda S, Fukushima K.
  Title
Evidence for the biosynthetic pathway from sinapic acid to syringyl lignin using labeled sinapic acid with stable isotope at both methoxy groups in Robinia pseudoacacia and Nerium indicum.
  Journal
J Agric Food Chem 50:3222-7 (2002)
DOI:10.1021/jf011565x
Reference
  Authors
Eckardt NA.
  Title
Probing the mysteries of lignin biosynthesis: the crystal structure of caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase provides new insights.
  Journal
Plant Cell 14:1185-9 (2002)
DOI:10.1105/tpc.140610
Related
pathway
cmo00130  Ubiquinone and other terpenoid-quinone biosynthesis
cmo00400  Phenylalanine, tyrosine and tryptophan biosynthesis
cmo00941  Flavonoid biosynthesis
cmo00945  Stilbenoid, diarylheptanoid and gingerol biosynthesis
KO pathway
ko00940   
LinkDB

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