KEGG   PATHWAY: crb01100
Entry
crb01100                    Pathway                                
Name
Metabolic pathways - Capsella rubella (pink shepherd's-purse)
Class
Pathway map
crb01100  Metabolic pathways
crb01100

Module
crb_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:crb01100]
crb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:crb01100]
crb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:crb01100]
crb_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:crb01100]
crb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:crb01100]
crb_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:crb01100]
crb_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:crb01100]
crb_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:crb01100]
crb_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:crb01100]
crb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:crb01100]
crb_M00012  Glyoxylate cycle [PATH:crb01100]
crb_M00015  Proline biosynthesis, glutamate => proline [PATH:crb01100]
crb_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:crb01100]
crb_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:crb01100]
crb_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:crb01100]
crb_M00021  Cysteine biosynthesis, serine => cysteine [PATH:crb01100]
crb_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:crb01100]
crb_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:crb01100]
crb_M00026  Histidine biosynthesis, PRPP => histidine [PATH:crb01100]
crb_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:crb01100]
crb_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:crb01100]
crb_M00034  Methionine salvage pathway [PATH:crb01100]
crb_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:crb01100]
crb_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:crb01100]
crb_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:crb01100]
crb_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:crb01100]
crb_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:crb01100]
crb_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:crb01100]
crb_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:crb01100]
crb_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:crb01100]
crb_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:crb01100]
crb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:crb01100]
crb_M00055  N-glycan precursor biosynthesis [PATH:crb01100]
crb_M00073  N-glycan precursor trimming [PATH:crb01100]
crb_M00081  Pectin degradation [PATH:crb01100]
crb_M00082  Fatty acid biosynthesis, initiation [PATH:crb01100]
crb_M00083  Fatty acid biosynthesis, elongation [PATH:crb01100]
crb_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:crb01100]
crb_M00087  beta-Oxidation [PATH:crb01100]
crb_M00089  Triacylglycerol biosynthesis [PATH:crb01100]
crb_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:crb01100]
crb_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:crb01100]
crb_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:crb01100]
crb_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:crb01100]
crb_M00098  Acylglycerol degradation [PATH:crb01100]
crb_M00100  Sphingosine degradation [PATH:crb01100]
crb_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:crb01100]
crb_M00113  Jasmonic acid biosynthesis [PATH:crb01100]
crb_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:crb01100]
crb_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:crb01100]
crb_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:crb01100]
crb_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:crb01100]
crb_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:crb01100]
crb_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:crb01100]
crb_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:crb01100]
crb_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:crb01100]
crb_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:crb01100]
crb_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:crb01100]
crb_M00142  NADH:ubiquinone oxidoreductase, mitochondria [PATH:crb01100]
crb_M00143  NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:crb01100]
crb_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:crb01100]
crb_M00148  Succinate dehydrogenase (ubiquinone) [PATH:crb01100]
crb_M00151  Cytochrome bc1 complex respiratory unit [PATH:crb01100]
crb_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:crb01100]
crb_M00161  Photosystem II [PATH:crb01100]
crb_M00163  Photosystem I [PATH:crb01100]
crb_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:crb01100]
crb_M00168  CAM (Crassulacean acid metabolism), dark [PATH:crb01100]
crb_M00169  CAM (Crassulacean acid metabolism), light [PATH:crb01100]
crb_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:crb01100]
crb_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:crb01100]
crb_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:crb01100]
crb_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:crb01100]
crb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:crb01100]
crb_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:crb01100]
crb_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:crb01100]
crb_M00370  Glucosinolate biosynthesis, tryptophan => glucobrassicin [PATH:crb01100]
crb_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:crb01100]
crb_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:crb01100]
crb_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:crb01100]
crb_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:crb01100]
crb_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:crb01100]
crb_M00532  Photorespiration [PATH:crb01100]
crb_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:crb01100]
crb_M00555  Betaine biosynthesis, choline => betaine [PATH:crb01100]
crb_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:crb01100]
crb_M00621  Glycine cleavage system [PATH:crb01100]
crb_M00844  Arginine biosynthesis, ornithine => arginine [PATH:crb01100]
crb_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:crb01100]
crb_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:crb01100]
crb_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:crb01100]
crb_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:crb01100]
crb_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:crb01100]
crb_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:crb01100]
crb_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:crb01100]
crb_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:crb01100]
crb_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:crb01100]
crb_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:crb01100]
crb_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:crb01100]
crb_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:crb01100]
crb_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:crb01100]
crb_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:crb01100]
crb_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:crb01100]
crb_M00970  Proline degradation, proline => glutamate [PATH:crb01100]
crb_M00972  Proline metabolism [PATH:crb01100]
Organism
Capsella rubella (pink shepherd's-purse) [GN:crb]
Related
pathway
crb00010  Glycolysis / Gluconeogenesis
crb00020  Citrate cycle (TCA cycle)
crb00030  Pentose phosphate pathway
crb00040  Pentose and glucuronate interconversions
crb00051  Fructose and mannose metabolism
crb00052  Galactose metabolism
crb00053  Ascorbate and aldarate metabolism
crb00061  Fatty acid biosynthesis
crb00062  Fatty acid elongation
crb00071  Fatty acid degradation
crb00073  Cutin, suberine and wax biosynthesis
crb00100  Steroid biosynthesis
crb00130  Ubiquinone and other terpenoid-quinone biosynthesis
crb00190  Oxidative phosphorylation
crb00195  Photosynthesis
crb00196  Photosynthesis - antenna proteins
crb00220  Arginine biosynthesis
crb00230  Purine metabolism
crb00232  Caffeine metabolism
crb00240  Pyrimidine metabolism
crb00250  Alanine, aspartate and glutamate metabolism
crb00260  Glycine, serine and threonine metabolism
crb00261  Monobactam biosynthesis
crb00270  Cysteine and methionine metabolism
crb00280  Valine, leucine and isoleucine degradation
crb00290  Valine, leucine and isoleucine biosynthesis
crb00300  Lysine biosynthesis
crb00310  Lysine degradation
crb00330  Arginine and proline metabolism
crb00340  Histidine metabolism
crb00350  Tyrosine metabolism
crb00360  Phenylalanine metabolism
crb00380  Tryptophan metabolism
crb00400  Phenylalanine, tyrosine and tryptophan biosynthesis
crb00410  beta-Alanine metabolism
crb00430  Taurine and hypotaurine metabolism
crb00440  Phosphonate and phosphinate metabolism
crb00450  Selenocompound metabolism
crb00460  Cyanoamino acid metabolism
crb00470  D-Amino acid metabolism
crb00480  Glutathione metabolism
crb00500  Starch and sucrose metabolism
crb00510  N-Glycan biosynthesis
crb00511  Other glycan degradation
crb00513  Various types of N-glycan biosynthesis
crb00514  Other types of O-glycan biosynthesis
crb00520  Amino sugar and nucleotide sugar metabolism
crb00531  Glycosaminoglycan degradation
crb00543  Exopolysaccharide biosynthesis
crb00561  Glycerolipid metabolism
crb00562  Inositol phosphate metabolism
crb00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
crb00564  Glycerophospholipid metabolism
crb00565  Ether lipid metabolism
crb00590  Arachidonic acid metabolism
crb00591  Linoleic acid metabolism
crb00592  alpha-Linolenic acid metabolism
crb00600  Sphingolipid metabolism
crb00601  Glycosphingolipid biosynthesis - lacto and neolacto series
crb00603  Glycosphingolipid biosynthesis - globo and isoglobo series
crb00604  Glycosphingolipid biosynthesis - ganglio series
crb00620  Pyruvate metabolism
crb00630  Glyoxylate and dicarboxylate metabolism
crb00640  Propanoate metabolism
crb00650  Butanoate metabolism
crb00660  C5-Branched dibasic acid metabolism
crb00670  One carbon pool by folate
crb00710  Carbon fixation in photosynthetic organisms
crb00730  Thiamine metabolism
crb00740  Riboflavin metabolism
crb00750  Vitamin B6 metabolism
crb00760  Nicotinate and nicotinamide metabolism
crb00770  Pantothenate and CoA biosynthesis
crb00780  Biotin metabolism
crb00785  Lipoic acid metabolism
crb00790  Folate biosynthesis
crb00860  Porphyrin metabolism
crb00900  Terpenoid backbone biosynthesis
crb00901  Indole alkaloid biosynthesis
crb00902  Monoterpenoid biosynthesis
crb00904  Diterpenoid biosynthesis
crb00905  Brassinosteroid biosynthesis
crb00906  Carotenoid biosynthesis
crb00908  Zeatin biosynthesis
crb00909  Sesquiterpenoid and triterpenoid biosynthesis
crb00910  Nitrogen metabolism
crb00920  Sulfur metabolism
crb00940  Phenylpropanoid biosynthesis
crb00941  Flavonoid biosynthesis
crb00942  Anthocyanin biosynthesis
crb00944  Flavone and flavonol biosynthesis
crb00950  Isoquinoline alkaloid biosynthesis
crb00960  Tropane, piperidine and pyridine alkaloid biosynthesis
crb00965  Betalain biosynthesis
crb00966  Glucosinolate biosynthesis
crb00999  Biosynthesis of various plant secondary metabolites
crb01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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