KEGG   PATHWAY: dden00010
Entry
dden00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Dechloromonas denitrificans
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dden00010  Glycolysis / Gluconeogenesis
dden00010

Module
dden_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dden00010]
dden_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dden00010]
dden_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dden00010]
dden_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dden00010]
Other DBs
GO: 0006096 0006094
Organism
Dechloromonas denitrificans [GN:dden]
Gene
KI615_18240  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
KI615_18280  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
KI615_06535  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
KI615_19150  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
KI615_19225  class 1 fructose-bisphosphatase [KO:K01086] [EC:3.1.3.11 3.1.3.37]
KI615_19190  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
KI615_19205  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
KI615_17195  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
KI615_19165  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
KI615_19210  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
KI615_19180  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
KI615_18190  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
KI615_01440  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
KI615_12330  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
KI615_19185  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
KI615_14335  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
KI615_19685  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
KI615_19680  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
KI615_07010  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KI615_19675  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KI615_07110  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
KI615_10010  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
KI615_08765  zinc-dependent alcohol dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
KI615_18815  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
KI615_16260  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
KI615_02105  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KI615_03285  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KI615_09685  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KI615_05240  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
KI615_06160  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
KI615_08935  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
KI615_05725  phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dden00020  Citrate cycle (TCA cycle)
dden00030  Pentose phosphate pathway
dden00500  Starch and sucrose metabolism
dden00620  Pyruvate metabolism
dden00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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