Entry Name Protein export - Dickeya dianthicola
Description The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.
Class Genetic Information Processing; Folding, sorting and degradationBRITE hierarchy
Pathway map Ortholog table Other DBs Organism Dickeya dianthicola [GN:
ddq ]
Gene DDI_3826 Preprotein translocase secY subunit (T 3.A.5.1.1) [KO:K03076 ]
DDI_4537 Preprotein translocase subunit SecE (T 3.A.5.1.1) [KO:K03073 ]
DDI_0450 Preprotein translocase subunit SecG (T 3.A.5.1.1) [KO:K03075 ]
DDI_0860 Protein-export membrane protein SecD (T 3.A.5.1.1) [KO:K03072 ]
DDI_0861 Protein-export membrane protein SecF (T 3.A.5.1.1) [KO:K03074 ]
DDI_0859 Preprotein translocase subunit YajC (T 3.A.5.1.1) [KO:K03210 ]
DDI_4306 Inner membrane protein translocase componen YidC, long form [KO:K03217 ]
DDI_4494 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) [KO:K03071 ]
DDI_4110 Signal recognition particle receptor protein FtsY (alpha subunit) [KO:K03110 ]
Reference Authors Dalbey RE, Robinson C.
Title Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane.
Journal Reference Authors Berks BC, Sargent F, Palmer T.
Title The Tat protein export pathway.
Journal Reference Authors Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T.
Title TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export.
Journal Reference Authors Jongbloed JD, Martin U, Antelmann H, Hecker M, Tjalsma H, Venema G, Bron S, van Dijl JM, Muller J.
Title TatC is a specificity determinant for protein secretion via the twin-arginine translocation pathway.
Journal Reference Authors Rapoport TA
Title Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.
Journal Reference Authors Flower AM
Title The SecY translocation complex: convergence of genetics and structure.
Journal Reference Authors Osborne AR, Rapoport TA, van den Berg B
Title Protein translocation by the Sec61/SecY channel.
Journal Reference Authors Paetzel M, Karla A, Strynadka NC, Dalbey RE
Title Signal peptidases.
Journal Reference Authors Paetzel M, Dalbey RE, Strynadka NC
Title The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target.
Journal Reference Authors Ng SY, Chaban B, VanDyke DJ, Jarrell KF
Title Archaeal signal peptidases.
Journal Reference Authors Desvaux M, Hebraud M, Talon R, Henderson IR
Title Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue.
Journal Reference Authors Nakatogawa H, Murakami A, Ito K
Title Control of SecA and SecM translation by protein secretion.
Journal KO pathway LinkDB All DBs
