KEGG   PATHWAY: dfn01100
Entry
dfn01100                    Pathway                                
Name
Metabolic pathways - Dickeya fangzhongdai DSM 101947
Class
Pathway map
dfn01100  Metabolic pathways
dfn01100

Module
dfn_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dfn01100]
dfn_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dfn01100]
dfn_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dfn01100]
dfn_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:dfn01100]
dfn_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:dfn01100]
dfn_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:dfn01100]
dfn_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:dfn01100]
dfn_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:dfn01100]
dfn_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:dfn01100]
dfn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:dfn01100]
dfn_M00012  Glyoxylate cycle [PATH:dfn01100]
dfn_M00015  Proline biosynthesis, glutamate => proline [PATH:dfn01100]
dfn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:dfn01100]
dfn_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:dfn01100]
dfn_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:dfn01100]
dfn_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:dfn01100]
dfn_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:dfn01100]
dfn_M00021  Cysteine biosynthesis, serine => cysteine [PATH:dfn01100]
dfn_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:dfn01100]
dfn_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:dfn01100]
dfn_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:dfn01100]
dfn_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:dfn01100]
dfn_M00026  Histidine biosynthesis, PRPP => histidine [PATH:dfn01100]
dfn_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:dfn01100]
dfn_M00034  Methionine salvage pathway [PATH:dfn01100]
dfn_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:dfn01100]
dfn_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dfn01100]
dfn_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dfn01100]
dfn_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dfn01100]
dfn_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:dfn01100]
dfn_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:dfn01100]
dfn_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dfn01100]
dfn_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:dfn01100]
dfn_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:dfn01100]
dfn_M00063  CMP-KDO biosynthesis [PATH:dfn01100]
dfn_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:dfn01100]
dfn_M00082  Fatty acid biosynthesis, initiation [PATH:dfn01100]
dfn_M00083  Fatty acid biosynthesis, elongation [PATH:dfn01100]
dfn_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:dfn01100]
dfn_M00087  beta-Oxidation [PATH:dfn01100]
dfn_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:dfn01100]
dfn_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:dfn01100]
dfn_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:dfn01100]
dfn_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:dfn01100]
dfn_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:dfn01100]
dfn_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:dfn01100]
dfn_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:dfn01100]
dfn_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:dfn01100]
dfn_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:dfn01100]
dfn_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:dfn01100]
dfn_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:dfn01100]
dfn_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:dfn01100]
dfn_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:dfn01100]
dfn_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:dfn01100]
dfn_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:dfn01100]
dfn_M00149  Succinate dehydrogenase, prokaryotes [PATH:dfn01100]
dfn_M00150  Fumarate reductase, prokaryotes [PATH:dfn01100]
dfn_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:dfn01100]
dfn_M00168  CAM (Crassulacean acid metabolism), dark [PATH:dfn01100]
dfn_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:dfn01100]
dfn_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:dfn01100]
dfn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dfn01100]
dfn_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:dfn01100]
dfn_M00417  Cytochrome o ubiquinol oxidase [PATH:dfn01100]
dfn_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:dfn01100]
dfn_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:dfn01100]
dfn_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:dfn01100]
dfn_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:dfn01100]
dfn_M00555  Betaine biosynthesis, choline => betaine [PATH:dfn01100]
dfn_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:dfn01100]
dfn_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:dfn01100]
dfn_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:dfn01100]
dfn_M00621  Glycine cleavage system [PATH:dfn01100]
dfn_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:dfn01100]
dfn_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:dfn01100]
dfn_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:dfn01100]
dfn_M00793  dTDP-L-rhamnose biosynthesis [PATH:dfn01100]
dfn_M00844  Arginine biosynthesis, ornithine => arginine [PATH:dfn01100]
dfn_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:dfn01100]
dfn_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:dfn01100]
dfn_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:dfn01100]
dfn_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:dfn01100]
dfn_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:dfn01100]
dfn_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:dfn01100]
dfn_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:dfn01100]
dfn_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:dfn01100]
dfn_M00970  Proline degradation, proline => glutamate [PATH:dfn01100]
Organism
Dickeya fangzhongdai DSM 101947 [GN:dfn]
Related
pathway
dfn00010  Glycolysis / Gluconeogenesis
dfn00020  Citrate cycle (TCA cycle)
dfn00030  Pentose phosphate pathway
dfn00040  Pentose and glucuronate interconversions
dfn00051  Fructose and mannose metabolism
dfn00052  Galactose metabolism
dfn00053  Ascorbate and aldarate metabolism
dfn00061  Fatty acid biosynthesis
dfn00071  Fatty acid degradation
dfn00130  Ubiquinone and other terpenoid-quinone biosynthesis
dfn00190  Oxidative phosphorylation
dfn00220  Arginine biosynthesis
dfn00230  Purine metabolism
dfn00240  Pyrimidine metabolism
dfn00250  Alanine, aspartate and glutamate metabolism
dfn00260  Glycine, serine and threonine metabolism
dfn00261  Monobactam biosynthesis
dfn00270  Cysteine and methionine metabolism
dfn00280  Valine, leucine and isoleucine degradation
dfn00290  Valine, leucine and isoleucine biosynthesis
dfn00300  Lysine biosynthesis
dfn00310  Lysine degradation
dfn00330  Arginine and proline metabolism
dfn00332  Carbapenem biosynthesis
dfn00340  Histidine metabolism
dfn00350  Tyrosine metabolism
dfn00360  Phenylalanine metabolism
dfn00361  Chlorocyclohexane and chlorobenzene degradation
dfn00362  Benzoate degradation
dfn00364  Fluorobenzoate degradation
dfn00380  Tryptophan metabolism
dfn00400  Phenylalanine, tyrosine and tryptophan biosynthesis
dfn00401  Novobiocin biosynthesis
dfn00410  beta-Alanine metabolism
dfn00430  Taurine and hypotaurine metabolism
dfn00440  Phosphonate and phosphinate metabolism
dfn00450  Selenocompound metabolism
dfn00460  Cyanoamino acid metabolism
dfn00470  D-Amino acid metabolism
dfn00480  Glutathione metabolism
dfn00500  Starch and sucrose metabolism
dfn00511  Other glycan degradation
dfn00520  Amino sugar and nucleotide sugar metabolism
dfn00521  Streptomycin biosynthesis
dfn00523  Polyketide sugar unit biosynthesis
dfn00525  Acarbose and validamycin biosynthesis
dfn00540  Lipopolysaccharide biosynthesis
dfn00541  O-Antigen nucleotide sugar biosynthesis
dfn00542  O-Antigen repeat unit biosynthesis
dfn00543  Exopolysaccharide biosynthesis
dfn00550  Peptidoglycan biosynthesis
dfn00552  Teichoic acid biosynthesis
dfn00561  Glycerolipid metabolism
dfn00562  Inositol phosphate metabolism
dfn00564  Glycerophospholipid metabolism
dfn00565  Ether lipid metabolism
dfn00592  alpha-Linolenic acid metabolism
dfn00600  Sphingolipid metabolism
dfn00620  Pyruvate metabolism
dfn00623  Toluene degradation
dfn00625  Chloroalkane and chloroalkene degradation
dfn00626  Naphthalene degradation
dfn00627  Aminobenzoate degradation
dfn00630  Glyoxylate and dicarboxylate metabolism
dfn00633  Nitrotoluene degradation
dfn00640  Propanoate metabolism
dfn00650  Butanoate metabolism
dfn00660  C5-Branched dibasic acid metabolism
dfn00670  One carbon pool by folate
dfn00680  Methane metabolism
dfn00730  Thiamine metabolism
dfn00740  Riboflavin metabolism
dfn00750  Vitamin B6 metabolism
dfn00760  Nicotinate and nicotinamide metabolism
dfn00770  Pantothenate and CoA biosynthesis
dfn00780  Biotin metabolism
dfn00785  Lipoic acid metabolism
dfn00790  Folate biosynthesis
dfn00791  Atrazine degradation
dfn00860  Porphyrin metabolism
dfn00900  Terpenoid backbone biosynthesis
dfn00907  Pinene, camphor and geraniol degradation
dfn00910  Nitrogen metabolism
dfn00920  Sulfur metabolism
dfn00930  Caprolactam degradation
dfn00946  Degradation of flavonoids
dfn00997  Biosynthesis of various other secondary metabolites
dfn00998  Biosynthesis of various antibiotics
dfn00999  Biosynthesis of various plant secondary metabolites
dfn01040  Biosynthesis of unsaturated fatty acids
dfn01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system