KEGG   PATHWAY: dfn03440
Entry
dfn03440                    Pathway                                
Name
Homologous recombination - Dickeya fangzhongdai DSM 101947
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
dfn03440  Homologous recombination
dfn03440

Other DBs
GO: 0000724
Organism
Dickeya fangzhongdai DSM 101947 [GN:dfn]
Gene
CVE23_03840  single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
CVE23_02870  single-stranded DNA-binding protein [KO:K03111]
CVE23_18350  single-stranded DNA-binding protein SSB1 [KO:K03111]
CVE23_00015  DNA replication and repair protein RecF [KO:K03629]
CVE23_16555  DNA repair protein RecO [KO:K03584]
CVE23_06165  recombination protein RecR [KO:K06187]
CVE23_17090  recA; recombinase RecA [KO:K03553]
CVE23_22135  DNA polymerase I [KO:K02335] [EC:2.7.7.7]
CVE23_10615  Holliday junction branch migration protein RuvA [KO:K03550]
CVE23_10620  Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
CVE23_10560  crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
CVE23_22070  DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
CVE23_11615  recB; exodeoxyribonuclease V subunit beta [KO:K03582] [EC:3.1.11.5]
CVE23_11620  recC; exodeoxyribonuclease V subunit gamma [KO:K03583] [EC:3.1.11.5]
CVE23_11610  recD; exodeoxyribonuclease V subunit alpha [KO:K03581] [EC:3.1.11.5]
CVE23_05455  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
CVE23_00010  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
CVE23_06155  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
CVE23_06580  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
CVE23_13835  holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
CVE23_16900  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
CVE23_10690  DNA polymerase III subunit theta [KO:K02345] [EC:2.7.7.7]
CVE23_02135  DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
CVE23_03715  DNA polymerase III subunit psi [KO:K02344] [EC:2.7.7.7]
CVE23_21255  primosomal protein N' [KO:K04066] [EC:5.6.2.4]
CVE23_17965  primosomal replication protein N [KO:K02686]
CVE23_06135  prephenate dehydrogenase [KO:K04067]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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