PATHWAY: edh01100 Help Entry edh01100                    Pathway                                 Name Metabolic pathways - Escherichia coli DH1 Class BRITE hierarchy Pathway map edh01100   Metabolic pathways Module edh_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:edh01100] edh_M00002   Glycolysis, core module involving three-carbon compounds [PATH:edh01100] edh_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:edh01100] edh_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:edh01100] edh_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:edh01100] edh_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:edh01100] edh_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:edh01100] edh_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:edh01100] edh_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:edh01100] edh_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:edh01100] edh_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:edh01100] edh_M00012   Glyoxylate cycle [PATH:edh01100] edh_M00015   Proline biosynthesis, glutamate => proline [PATH:edh01100] edh_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:edh01100] edh_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:edh01100] edh_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:edh01100] edh_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:edh01100] edh_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:edh01100] edh_M00021   Cysteine biosynthesis, serine => cysteine [PATH:edh01100] edh_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:edh01100] edh_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:edh01100] edh_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:edh01100] edh_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:edh01100] edh_M00026   Histidine biosynthesis, PRPP => histidine [PATH:edh01100] edh_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:edh01100] edh_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:edh01100] edh_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:edh01100] edh_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:edh01100] edh_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:edh01100] edh_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:edh01100] edh_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:edh01100] edh_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:edh01100] edh_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:edh01100] edh_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:edh01100] edh_M00063   CMP-KDO biosynthesis [PATH:edh01100] edh_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:edh01100] edh_M00082   Fatty acid biosynthesis, initiation [PATH:edh01100] edh_M00083   Fatty acid biosynthesis, elongation [PATH:edh01100] edh_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:edh01100] edh_M00087   beta-Oxidation [PATH:edh01100] edh_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:edh01100] edh_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:edh01100] edh_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:edh01100] edh_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:edh01100] edh_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:edh01100] edh_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:edh01100] edh_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:edh01100] edh_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:edh01100] edh_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:edh01100] edh_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:edh01100] edh_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:edh01100] edh_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:edh01100] edh_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:edh01100] edh_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:edh01100] edh_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:edh01100] edh_M00136   GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:edh01100] edh_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:edh01100] edh_M00149   Succinate dehydrogenase, prokaryotes [PATH:edh01100] edh_M00150   Fumarate reductase, prokaryotes [PATH:edh01100] edh_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:edh01100] edh_M00168   CAM (Crassulacean acid metabolism), dark [PATH:edh01100] edh_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:edh01100] edh_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:edh01100] edh_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:edh01100] edh_M00417   Cytochrome o ubiquinol oxidase [PATH:edh01100] edh_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:edh01100] edh_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:edh01100] edh_M00545   Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:edh01100] edh_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:edh01100] edh_M00550   Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:edh01100] edh_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:edh01100] edh_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:edh01100] edh_M00555   Betaine biosynthesis, choline => betaine [PATH:edh01100] edh_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:edh01100] edh_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:edh01100] edh_M00621   Glycine cleavage system [PATH:edh01100] edh_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:edh01100] edh_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:edh01100] edh_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:edh01100] edh_M00793   dTDP-L-rhamnose biosynthesis [PATH:edh01100] edh_M00844   Arginine biosynthesis, ornithine => arginine [PATH:edh01100] edh_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:edh01100] edh_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:edh01100] edh_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:edh01100] edh_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:edh01100] edh_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:edh01100] edh_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:edh01100] edh_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:edh01100] edh_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:edh01100] edh_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:edh01100] edh_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:edh01100] edh_M00956   Lysine degradation, bacteria, L-lysine => succinate [PATH:edh01100] edh_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:edh01100] edh_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:edh01100] edh_M00970   Proline degradation, proline => glutamate [PATH:edh01100] Organism Escherichia coli DH1 [GN:edh] Related pathway edh00010   Glycolysis / Gluconeogenesis edh00020   Citrate cycle (TCA cycle) edh00030   Pentose phosphate pathway edh00040   Pentose and glucuronate interconversions edh00051   Fructose and mannose metabolism edh00052   Galactose metabolism edh00053   Ascorbate and aldarate metabolism edh00061   Fatty acid biosynthesis edh00071   Fatty acid degradation edh00121   Secondary bile acid biosynthesis edh00130   Ubiquinone and other terpenoid-quinone biosynthesis edh00190   Oxidative phosphorylation edh00220   Arginine biosynthesis edh00230   Purine metabolism edh00240   Pyrimidine metabolism edh00250   Alanine, aspartate and glutamate metabolism edh00260   Glycine, serine and threonine metabolism edh00261   Monobactam biosynthesis edh00270   Cysteine and methionine metabolism edh00280   Valine, leucine and isoleucine degradation edh00290   Valine, leucine and isoleucine biosynthesis edh00300   Lysine biosynthesis edh00310   Lysine degradation edh00330   Arginine and proline metabolism edh00332   Carbapenem biosynthesis edh00340   Histidine metabolism edh00350   Tyrosine metabolism edh00360   Phenylalanine metabolism edh00361   Chlorocyclohexane and chlorobenzene degradation edh00362   Benzoate degradation edh00364   Fluorobenzoate degradation edh00380   Tryptophan metabolism edh00400   Phenylalanine, tyrosine and tryptophan biosynthesis edh00401   Novobiocin biosynthesis edh00410   beta-Alanine metabolism edh00430   Taurine and hypotaurine metabolism edh00440   Phosphonate and phosphinate metabolism edh00450   Selenocompound metabolism edh00460   Cyanoamino acid metabolism edh00470   D-Amino acid metabolism edh00480   Glutathione metabolism edh00500   Starch and sucrose metabolism edh00511   Other glycan degradation edh00520   Amino sugar and nucleotide sugar metabolism edh00521   Streptomycin biosynthesis edh00523   Polyketide sugar unit biosynthesis edh00525   Acarbose and validamycin biosynthesis edh00540   Lipopolysaccharide biosynthesis edh00541   O-Antigen nucleotide sugar biosynthesis edh00542   O-Antigen repeat unit biosynthesis edh00543   Exopolysaccharide biosynthesis edh00550   Peptidoglycan biosynthesis edh00552   Teichoic acid biosynthesis edh00561   Glycerolipid metabolism edh00562   Inositol phosphate metabolism edh00564   Glycerophospholipid metabolism edh00565   Ether lipid metabolism edh00592   alpha-Linolenic acid metabolism edh00600   Sphingolipid metabolism edh00620   Pyruvate metabolism edh00621   Dioxin degradation edh00622   Xylene degradation edh00623   Toluene degradation edh00625   Chloroalkane and chloroalkene degradation edh00626   Naphthalene degradation edh00627   Aminobenzoate degradation edh00630   Glyoxylate and dicarboxylate metabolism edh00633   Nitrotoluene degradation edh00640   Propanoate metabolism edh00650   Butanoate metabolism edh00660   C5-Branched dibasic acid metabolism edh00670   One carbon pool by folate edh00680   Methane metabolism edh00730   Thiamine metabolism edh00740   Riboflavin metabolism edh00750   Vitamin B6 metabolism edh00760   Nicotinate and nicotinamide metabolism edh00770   Pantothenate and CoA biosynthesis edh00780   Biotin metabolism edh00785   Lipoic acid metabolism edh00790   Folate biosynthesis edh00860   Porphyrin metabolism edh00900   Terpenoid backbone biosynthesis edh00907   Pinene, camphor and geraniol degradation edh00910   Nitrogen metabolism edh00920   Sulfur metabolism edh00930   Caprolactam degradation edh00946   Degradation of flavonoids edh00999   Biosynthesis of various plant secondary metabolites edh01040   Biosynthesis of unsaturated fatty acids edh01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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