PATHWAY: edj01100 Help Entry edj01100                    Pathway                                 Name Metabolic pathways - Escherichia coli DH1 Class BRITE hierarchy Pathway map edj01100   Metabolic pathways Module edj_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:edj01100] edj_M00002   Glycolysis, core module involving three-carbon compounds [PATH:edj01100] edj_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:edj01100] edj_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:edj01100] edj_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:edj01100] edj_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:edj01100] edj_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:edj01100] edj_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:edj01100] edj_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:edj01100] edj_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:edj01100] edj_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:edj01100] edj_M00012   Glyoxylate cycle [PATH:edj01100] edj_M00015   Proline biosynthesis, glutamate => proline [PATH:edj01100] edj_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:edj01100] edj_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:edj01100] edj_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:edj01100] edj_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:edj01100] edj_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:edj01100] edj_M00021   Cysteine biosynthesis, serine => cysteine [PATH:edj01100] edj_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:edj01100] edj_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:edj01100] edj_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:edj01100] edj_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:edj01100] edj_M00026   Histidine biosynthesis, PRPP => histidine [PATH:edj01100] edj_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:edj01100] edj_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:edj01100] edj_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:edj01100] edj_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:edj01100] edj_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:edj01100] edj_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:edj01100] edj_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:edj01100] edj_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:edj01100] edj_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:edj01100] edj_M00063   CMP-KDO biosynthesis [PATH:edj01100] edj_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:edj01100] edj_M00082   Fatty acid biosynthesis, initiation [PATH:edj01100] edj_M00083   Fatty acid biosynthesis, elongation [PATH:edj01100] edj_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:edj01100] edj_M00087   beta-Oxidation [PATH:edj01100] edj_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:edj01100] edj_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:edj01100] edj_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:edj01100] edj_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:edj01100] edj_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:edj01100] edj_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:edj01100] edj_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:edj01100] edj_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:edj01100] edj_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:edj01100] edj_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:edj01100] edj_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:edj01100] edj_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:edj01100] edj_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:edj01100] edj_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:edj01100] edj_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:edj01100] edj_M00136   GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:edj01100] edj_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:edj01100] edj_M00149   Succinate dehydrogenase, prokaryotes [PATH:edj01100] edj_M00150   Fumarate reductase, prokaryotes [PATH:edj01100] edj_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:edj01100] edj_M00168   CAM (Crassulacean acid metabolism), dark [PATH:edj01100] edj_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:edj01100] edj_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:edj01100] edj_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:edj01100] edj_M00417   Cytochrome o ubiquinol oxidase [PATH:edj01100] edj_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:edj01100] edj_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:edj01100] edj_M00545   Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:edj01100] edj_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:edj01100] edj_M00550   Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:edj01100] edj_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:edj01100] edj_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:edj01100] edj_M00555   Betaine biosynthesis, choline => betaine [PATH:edj01100] edj_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:edj01100] edj_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:edj01100] edj_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:edj01100] edj_M00621   Glycine cleavage system [PATH:edj01100] edj_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:edj01100] edj_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:edj01100] edj_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:edj01100] edj_M00793   dTDP-L-rhamnose biosynthesis [PATH:edj01100] edj_M00844   Arginine biosynthesis, ornithine => arginine [PATH:edj01100] edj_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:edj01100] edj_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:edj01100] edj_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:edj01100] edj_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:edj01100] edj_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:edj01100] edj_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:edj01100] edj_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:edj01100] edj_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:edj01100] edj_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:edj01100] edj_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:edj01100] edj_M00956   Lysine degradation, bacteria, L-lysine => succinate [PATH:edj01100] edj_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:edj01100] edj_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:edj01100] edj_M00970   Proline degradation, proline => glutamate [PATH:edj01100] Organism Escherichia coli DH1 [GN:edj] Related pathway edj00010   Glycolysis / Gluconeogenesis edj00020   Citrate cycle (TCA cycle) edj00030   Pentose phosphate pathway edj00040   Pentose and glucuronate interconversions edj00051   Fructose and mannose metabolism edj00052   Galactose metabolism edj00053   Ascorbate and aldarate metabolism edj00061   Fatty acid biosynthesis edj00071   Fatty acid degradation edj00121   Secondary bile acid biosynthesis edj00130   Ubiquinone and other terpenoid-quinone biosynthesis edj00190   Oxidative phosphorylation edj00220   Arginine biosynthesis edj00230   Purine metabolism edj00240   Pyrimidine metabolism edj00250   Alanine, aspartate and glutamate metabolism edj00260   Glycine, serine and threonine metabolism edj00261   Monobactam biosynthesis edj00270   Cysteine and methionine metabolism edj00280   Valine, leucine and isoleucine degradation edj00290   Valine, leucine and isoleucine biosynthesis edj00300   Lysine biosynthesis edj00310   Lysine degradation edj00330   Arginine and proline metabolism edj00332   Carbapenem biosynthesis edj00340   Histidine metabolism edj00350   Tyrosine metabolism edj00360   Phenylalanine metabolism edj00361   Chlorocyclohexane and chlorobenzene degradation edj00362   Benzoate degradation edj00364   Fluorobenzoate degradation edj00380   Tryptophan metabolism edj00400   Phenylalanine, tyrosine and tryptophan biosynthesis edj00401   Novobiocin biosynthesis edj00410   beta-Alanine metabolism edj00430   Taurine and hypotaurine metabolism edj00440   Phosphonate and phosphinate metabolism edj00450   Selenocompound metabolism edj00460   Cyanoamino acid metabolism edj00470   D-Amino acid metabolism edj00480   Glutathione metabolism edj00500   Starch and sucrose metabolism edj00511   Other glycan degradation edj00520   Amino sugar and nucleotide sugar metabolism edj00521   Streptomycin biosynthesis edj00523   Polyketide sugar unit biosynthesis edj00525   Acarbose and validamycin biosynthesis edj00540   Lipopolysaccharide biosynthesis edj00541   O-Antigen nucleotide sugar biosynthesis edj00542   O-Antigen repeat unit biosynthesis edj00543   Exopolysaccharide biosynthesis edj00550   Peptidoglycan biosynthesis edj00552   Teichoic acid biosynthesis edj00561   Glycerolipid metabolism edj00562   Inositol phosphate metabolism edj00564   Glycerophospholipid metabolism edj00565   Ether lipid metabolism edj00592   alpha-Linolenic acid metabolism edj00600   Sphingolipid metabolism edj00620   Pyruvate metabolism edj00621   Dioxin degradation edj00622   Xylene degradation edj00623   Toluene degradation edj00625   Chloroalkane and chloroalkene degradation edj00626   Naphthalene degradation edj00627   Aminobenzoate degradation edj00630   Glyoxylate and dicarboxylate metabolism edj00633   Nitrotoluene degradation edj00640   Propanoate metabolism edj00650   Butanoate metabolism edj00660   C5-Branched dibasic acid metabolism edj00670   One carbon pool by folate edj00680   Methane metabolism edj00730   Thiamine metabolism edj00740   Riboflavin metabolism edj00750   Vitamin B6 metabolism edj00760   Nicotinate and nicotinamide metabolism edj00770   Pantothenate and CoA biosynthesis edj00780   Biotin metabolism edj00785   Lipoic acid metabolism edj00790   Folate biosynthesis edj00860   Porphyrin metabolism edj00900   Terpenoid backbone biosynthesis edj00907   Pinene, camphor and geraniol degradation edj00910   Nitrogen metabolism edj00920   Sulfur metabolism edj00930   Caprolactam degradation edj00946   Degradation of flavonoids edj00999   Biosynthesis of various plant secondary metabolites edj01040   Biosynthesis of unsaturated fatty acids edj01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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