KEGG   PATHWAY: equ00030
Entry
equ00030                    Pathway                                
Name
Pentose phosphate pathway - Enterobacter quasiroggenkampii
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
equ00030  Pentose phosphate pathway
equ00030

Module
equ_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:equ00030]
equ_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:equ00030]
equ_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:equ00030]
equ_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:equ00030]
equ_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:equ00030]
equ_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:equ00030]
equ_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:equ00030]
Other DBs
GO: 0006098
Organism
Enterobacter quasiroggenkampii [GN:equ]
Gene
OM418_01220  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
OM418_13340  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
OM418_02395  lactonase family protein [KO:K07404] [EC:3.1.1.31]
OM418_06360  pgl; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
OM418_14235  gndA; NADP-dependent phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
OM418_20620  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
OM418_15385  transketolase family protein [KO:K00615] [EC:2.2.1.1]
OM418_15390  transketolase [KO:K00615] [EC:2.2.1.1]
OM418_16025  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
OM418_18320  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
OM418_03270  tal; transaldolase [KO:K00616] [EC:2.2.1.2]
OM418_16020  tal; transaldolase [KO:K00616] [EC:2.2.1.2]
OM418_18280  rpiA; ribose-5-phosphate isomerase RpiA [KO:K01807] [EC:5.3.1.6]
OM418_03085  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
OM418_22085  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
OM418_03095  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
OM418_06050  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
OM418_01705  phnN; ribose 1,5-bisphosphokinase [KO:K05774] [EC:2.7.4.23]
OM418_12730  prs; ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
OM418_13335  edd; phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
OM418_13330  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
OM418_03770  pyrroloquinoline quinone-dependent dehydrogenase [KO:K00117] [EC:1.1.5.2]
OM418_00870  ghrB; glyoxylate/hydroxypyruvate reductase GhrB [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
OM418_01435  gntK; gluconokinase [KO:K00851] [EC:2.7.1.12]
OM418_00880  sugar kinase [KO:K00874] [EC:2.7.1.45]
OM418_21065  sugar kinase [KO:K00874] [EC:2.7.1.45]
OM418_14490  fbaB; class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
OM418_01655  ketose 1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
OM418_18305  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
OM418_02325  fbp; class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
OM418_21760  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
OM418_21800  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
OM418_08815  pfkB; 6-phosphofructokinase II [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
equ00010  Glycolysis / Gluconeogenesis
equ00040  Pentose and glucuronate interconversions
equ00052  Galactose metabolism
equ00230  Purine metabolism
equ00240  Pyrimidine metabolism
equ00340  Histidine metabolism
equ00630  Glyoxylate and dicarboxylate metabolism
equ00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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