KEGG   PATHWAY: etb03070
Entry
etb03070                    Pathway                                
Name
Bacterial secretion system - Eleftheria terrae
Description
Gram-negative bacteria secrete a wide range of proteins whose functions include biogenesis of organelles, such as pilli and flagella, nutrient acquisition, virulence, and efflux of drugs and other toxins. Six distinct secretion systems have been shown to mediate protein export through the inner and outer membranes of Gram-negative bacteria. These pathways are highly conserved throughout the Gram-negative bacterial species. In Gram-positive bacteria, secreted proteins are commonly translocated across the single membrane by the Sec pathway or the two-arginine (Tat) pathway.
Class
Environmental Information Processing; Membrane transport
Pathway map
etb03070  Bacterial secretion system
etb03070

Other DBs
GO: 0030253 0015628 0030254 0030255 0046819 0033103 0044098 0043952 0043953
Organism
Eleftheria terrae [GN:etb]
Gene
N7L95_22760  TolC family outer membrane protein [KO:K12340]
N7L95_13520  HlyD family type I secretion periplasmic adaptor subunit [KO:K11003]
N7L95_13525  type I secretion system permease/ATPase [KO:K11004]
N7L95_18375  sctC; type III secretion system outer membrane ring subunit SctC [KO:K03219]
N7L95_00480  EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein [KO:K03222]
N7L95_18325  sctJ; type III secretion inner membrane ring lipoprotein SctJ [KO:K03222]
N7L95_18235  sctR; type III secretion system export apparatus subunit SctR [KO:K03226]
N7L95_18230  sctS; type III secretion system export apparatus subunit SctS [KO:K03227]
N7L95_18300  sctT; type III secretion system export apparatus subunit SctT [KO:K03228]
N7L95_18255  sctU; type III secretion system export apparatus subunit SctU [KO:K03229]
N7L95_18250  sctV; type III secretion system export apparatus subunit SctV [KO:K03230]
N7L95_18310  sctN; type III secretion system ATPase SctN [KO:K03224] [EC:7.4.2.8]
N7L95_18240  sctQ; type III secretion system cytoplasmic ring protein SctQ [KO:K03225]
N7L95_18315  sctL; type III secretion system stator protein SctL [KO:K03223]
N7L95_29325  secretin and TonB N-terminal domain-containing protein [KO:K02453]
N7L95_11290  gspD; type II secretion system secretin GspD [KO:K02453]
N7L95_24575  cohesin domain-containing protein [KO:K02453]
N7L95_11245  general secretion pathway protein C [KO:K02452]
N7L95_29295  type II secretion system F family protein [KO:K02455]
N7L95_11300  gspF; type II secretion system inner membrane protein GspF [KO:K02455]
N7L95_24600  type II secretion system F family protein [KO:K02455]
N7L95_29330  type II secretion system GspH family protein [KO:K02456]
N7L95_29335  type II secretion system GspH family protein [KO:K02456]
N7L95_11250  gspG; type II secretion system major pseudopilin GspG [KO:K02456]
N7L95_24565  type II secretion system GspH family protein [KO:K02456]
N7L95_24570  type II secretion system GspH family protein [KO:K02456]
N7L95_24605  gspG; type II secretion system major pseudopilin GspG [KO:K02456]
N7L95_11255  prepilin-type N-terminal cleavage/methylation domain-containing protein [KO:K02457]
N7L95_11260  gspI; type II secretion system minor pseudopilin GspI [KO:K02458]
N7L95_11265  prepilin-type N-terminal cleavage/methylation domain-containing protein [KO:K02459]
N7L95_11270  gspK; type II secretion system minor pseudopilin GspK [KO:K02460]
N7L95_11275  gspL; type II secretion system protein GspL [KO:K02461]
N7L95_11280  type II secretion system protein M [KO:K02462]
N7L95_29300  GspE/PulE family protein [KO:K02454] [EC:7.4.2.8]
N7L95_07515  ATPase, T2SS/T4P/T4SS family [KO:K02454] [EC:7.4.2.8]
N7L95_11295  gspE; type II secretion system ATPase GspE [KO:K02454] [EC:7.4.2.8]
N7L95_24595  GspE/PulE family protein [KO:K02454] [EC:7.4.2.8]
N7L95_12630  secD; protein translocase subunit SecD [KO:K03072]
N7L95_12625  secF; protein translocase subunit SecF [KO:K03074]
N7L95_17440  secE; preprotein translocase subunit SecE [KO:K03073]
N7L95_23260  secG; preprotein translocase subunit SecG [KO:K03075]
N7L95_17625  secY; preprotein translocase subunit SecY [KO:K03076]
N7L95_12635  yajC; preprotein translocase subunit YajC [KO:K03210]
N7L95_15505  yidC; membrane protein insertase YidC [KO:K03217]
N7L95_10410  secA; preprotein translocase subunit SecA [KO:K03070] [EC:7.4.2.8]
N7L95_19755  ftsY; signal recognition particle-docking protein FtsY [KO:K03110]
N7L95_19995  secB; protein-export chaperone SecB [KO:K03071]
N7L95_19765  ffh; signal recognition particle protein [KO:K03106] [EC:3.6.5.4]
N7L95_10485  tatA; Sec-independent protein translocase subunit TatA [KO:K03116]
N7L95_10480  tatB; Sec-independent protein translocase protein TatB [KO:K03117]
N7L95_10475  tatC; twin-arginine translocase subunit TatC [KO:K03118]
N7L95_26685  vgrG; type VI secretion system tip protein VgrG [KO:K11904]
N7L95_02530  vgrG; type VI secretion system tip protein VgrG [KO:K11904]
N7L95_05150  vgrG; type VI secretion system tip protein VgrG [KO:K11904]
N7L95_10760  vgrG; type VI secretion system tip protein VgrG [KO:K11904]
N7L95_13475  type VI secretion system tip protein VgrG [KO:K11904]
N7L95_13860  type VI secretion system tip protein VgrG [KO:K11904]
N7L95_26710  type VI secretion system tube protein Hcp [KO:K11903]
N7L95_26715  type VI secretion system tube protein Hcp [KO:K11903]
N7L95_26720  type VI secretion system tube protein Hcp [KO:K11903]
N7L95_05195  type VI secretion system tube protein Hcp [KO:K11903]
N7L95_05200  type VI secretion system tube protein Hcp [KO:K11903]
N7L95_23900  type VI secretion system tube protein Hcp [KO:K11903]
N7L95_05220  tssJ; type VI secretion system lipoprotein TssJ [KO:K11906]
N7L95_23880  tssJ; type VI secretion system lipoprotein TssJ [KO:K11906]
N7L95_05235  tssM; type VI secretion system membrane subunit TssM [KO:K11891]
N7L95_23850  tssM; type VI secretion system membrane subunit TssM [KO:K11891]
N7L95_05230  DotU family type VI secretion system protein [KO:K11892]
N7L95_23870  icmH; type IVB secretion system protein IcmH/DotU [KO:K11892]
N7L95_05170  tssH; type VI secretion system ATPase TssH [KO:K11907]
N7L95_23920  tssH; type VI secretion system ATPase TssH [KO:K11907]
Compound
C00002  ATP
Reference
PMID:11173102
  Authors
Kim JF.
  Title
Revisiting the chlamydial type III protein secretion system: clues to the origin of type III protein secretion.
  Journal
Trends Genet 17:65-9 (2001)
DOI:10.1016/S0168-9525(00)02175-2
Reference
PMID:11309112
  Authors
Plano GV, Day JB, Ferracci F.
  Title
Type III export: new uses for an old pathway.
  Journal
Mol Microbiol 40:284-93 (2001)
DOI:10.1046/j.1365-2958.2001.02354.x
Reference
PMID:11413015
  Authors
Gauthier A, Finlay BB.
  Title
Bacterial pathogenesis: the answer to virulence is in the pore.
  Journal
Curr Biol 11:R264-7 (2001)
DOI:10.1016/S0960-9822(01)00134-8
Reference
PMID:10047550
  Authors
Burns DL.
  Title
Biochemistry of type IV secretion.
  Journal
Curr Opin Microbiol 2:25-9 (1999)
DOI:10.1016/S1369-5274(99)80004-6
Reference
PMID:10920394
  Authors
Christie PJ, Vogel JP.
  Title
Bacterial type IV secretion: conjugation systems adapted to deliver effector molecules to host cells.
  Journal
Trends Microbiol 8:354-60 (2000)
DOI:10.1016/S0966-842X(00)01792-3
Reference
PMID:11309113
  Authors
Christie PJ.
  Title
Type IV secretion: intercellular transfer of macromolecules by systems ancestrally related to conjugation machines.
  Journal
Mol Microbiol 40:294-305 (2001)
DOI:10.1046/j.1365-2958.2001.02302.x
Reference
PMID:10481178
  Authors
Nunn D.
  Title
Bacterial type II protein export and pilus biogenesis: more than just homologies?
  Journal
Trends Cell Biol 9:402-8 (1999)
DOI:10.1016/S0962-8924(99)01634-7
Reference
PMID:11309111
  Authors
Sandkvist M.
  Title
Biology of type II secretion.
  Journal
Mol Microbiol 40:271-83 (2001)
DOI:10.1046/j.1365-2958.2001.02403.x
Reference
PMID:11349009
  Authors
Sandkvist M.
  Title
Type II secretion and pathogenesis.
  Journal
Infect Immun 69:3523-35 (2001)
DOI:10.1128/IAI.69.6.3523-3535.2001
Reference
PMID:15546664
  Authors
Delepelaire P
  Title
Type I secretion in gram-negative bacteria.
  Journal
Biochim Biophys Acta 1694:149-61 (2004)
DOI:10.1016/j.bbamcr.2004.05.001
Reference
PMID:18406342
  Authors
Hazes B, Frost L
  Title
Towards a systems biology approach to study type II/IV secretion systems.
  Journal
Biochim Biophys Acta 1778:1839-50 (2008)
DOI:10.1016/j.bbamem.2008.03.011
Reference
PMID:16448494
  Authors
Johnson TL, Abendroth J, Hol WG, Sandkvist M
  Title
Type II secretion: from structure to function.
  Journal
FEMS Microbiol Lett 255:175-86 (2006)
DOI:10.1111/j.1574-6968.2006.00102.x
Reference
PMID:15546665
  Authors
Filloux A
  Title
The underlying mechanisms of type II protein secretion.
  Journal
Biochim Biophys Acta 1694:163-79 (2004)
DOI:10.1016/j.bbamcr.2004.05.003
Reference
PMID:19396170
  Authors
Spreter T, Yip CK, Sanowar S, Andre I, Kimbrough TG, Vuckovic M, Pfuetzner RA, Deng W, Yu AC, Finlay BB, Baker D, Miller SI, Strynadka NC
  Title
A conserved structural motif mediates formation of the periplasmic rings in the type III secretion system.
  Journal
Nat Struct Mol Biol 16:468-76 (2009)
DOI:10.1038/nsmb.1603
Reference
PMID:15590783
  Authors
Ghosh P
  Title
Process of protein transport by the type III secretion system.
  Journal
Microbiol Mol Biol Rev 68:771-95 (2004)
DOI:10.1128/MMBR.68.4.771-795.2004
Reference
PMID:12360191
  Authors
Cornelis GR
  Title
The Yersinia Ysc-Yop 'type III' weaponry.
  Journal
Nat Rev Mol Cell Biol 3:742-52 (2002)
DOI:10.1038/nrm932
Reference
PMID:17215876
  Authors
Baron C
  Title
VirB8: a conserved type IV secretion system assembly factor and drug target.
  Journal
Biochem Cell Biol 84:890-9 (2006)
DOI:10.1139/o06-148
Reference
PMID:17943123
  Authors
Kwok T, Zabler D, Urman S, Rohde M, Hartig R, Wessler S, Misselwitz R, Berger J, Sewald N, Konig W, Backert S
  Title
Helicobacter exploits integrin for type IV secretion and kinase activation.
  Journal
Nature 449:862-6 (2007)
DOI:10.1038/nature06187
Reference
PMID:16092524
  Authors
Christie PJ, Cascales E
  Title
Structural and dynamic properties of bacterial type IV secretion systems (review).
  Journal
Mol Membr Biol 22:51-61 (2005)
DOI:10.1080/09687860500063316
Reference
PMID:15546668
  Authors
Christie PJ
  Title
Type IV secretion: the Agrobacterium VirB/D4 and related conjugation systems.
  Journal
Biochim Biophys Acta 1694:219-34 (2004)
DOI:10.1016/j.bbamcr.2004.02.013
Reference
PMID:15590781
  Authors
Henderson IR, Navarro-Garcia F, Desvaux M, Fernandez RC, Ala'Aldeen D
  Title
Type V protein secretion pathway: the autotransporter story.
  Journal
Microbiol Mol Biol Rev 68:692-744 (2004)
DOI:10.1128/MMBR.68.4.692-744.2004
Reference
PMID:9778731
  Authors
Henderson IR, Navarro-Garcia F, Nataro JP
  Title
The great escape: structure and function of the autotransporter proteins.
  Journal
Trends Microbiol 6:370-8 (1998)
DOI:10.1016/S0966-842X(98)01318-3
Reference
PMID:18524912
  Authors
Filloux A, Hachani A, Bleves S
  Title
The bacterial type VI secretion machine: yet another player for protein transport across membranes.
  Journal
Microbiology 154:1570-83 (2008)
DOI:10.1099/mic.0.2008/016840-0
Reference
PMID:19251641
  Authors
Leiman PG, Basler M, Ramagopal UA, Bonanno JB, Sauder JM, Pukatzki S, Burley SK, Almo SC, Mekalanos JJ
  Title
Type VI secretion apparatus and phage tail-associated protein complexes share a common evolutionary origin.
  Journal
Proc Natl Acad Sci U S A 106:4154-9 (2009)
DOI:10.1073/pnas.0813360106
Reference
PMID:17603507
  Authors
Kulasekara HD, Miller SI
  Title
Threonine phosphorylation times bacterial secretion.
  Journal
Nat Cell Biol 9:734-6 (2007)
DOI:10.1038/ncb0707-734
Reference
PMID:18078384
  Authors
Driessen AJ, Nouwen N
  Title
Protein translocation across the bacterial cytoplasmic membrane.
  Journal
Annu Rev Biochem 77:643-67 (2008)
DOI:10.1146/annurev.biochem.77.061606.160747
Reference
PMID:14641032
  Authors
Pool MR
  Title
Getting to the membrane: how is co-translational protein targeting to the endoplasmic reticulum regulated?
  Journal
Biochem Soc Trans 31:1232-7 (2003)
DOI:10.1042/bst0311232
Reference
PMID:19299134
  Authors
Desvaux M, Hebraud M, Talon R, Henderson IR
  Title
Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue.
  Journal
Trends Microbiol 17:139-45 (2009)
DOI:10.1016/j.tim.2009.01.004
Reference
PMID:15063851
  Authors
Nakatogawa H, Murakami A, Ito K
  Title
Control of SecA and SecM translation by protein secretion.
  Journal
Curr Opin Microbiol 7:145-50 (2004)
DOI:10.1016/j.mib.2004.01.001
KO pathway
ko03070   
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