KEGG   PATHWAY: fre00010
Entry
fre00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Parafrankia sp. EAN1pec
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
fre00010  Glycolysis / Gluconeogenesis
fre00010

Module
fre_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:fre00010]
fre_M00002  Glycolysis, core module involving three-carbon compounds [PATH:fre00010]
fre_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:fre00010]
fre_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:fre00010]
Other DBs
GO: 0006096 0006094
Organism
Parafrankia sp. EAN1pec [GN:fre]
Gene
Franean1_1825  putative glucokinase, ROK family [KO:K25026] [EC:2.7.1.2]
Franean1_7286  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Franean1_5856  transcriptional regulator, RpiR family [KO:K15916] [EC:5.3.1.9 5.3.1.8]
Franean1_2426  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Franean1_1832  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Franean1_0849  fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
Franean1_0217  fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Franean1_2065  Triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
Franean1_2063  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Franean1_2064  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Franean1_6148  phosphoglycerate mutase 1 family [KO:K01834] [EC:5.4.2.11]
Franean1_4520  phosphoglycerate mutase 1 family [KO:K01834] [EC:5.4.2.11]
Franean1_0807  Phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
Franean1_2211  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Franean1_6941  pyruvate phosphate dikinase PEP/pyruvate-binding [KO:K01007] [EC:2.7.9.2]
Franean1_2228  conserved hypothetical protein [KO:K00163] [EC:1.2.4.1]
Franean1_1860  2-oxo-acid dehydrogenase E1 subunit, homodimeric type [KO:K00163] [EC:1.2.4.1]
Franean1_7017  2-oxo-acid dehydrogenase E1 subunit, homodimeric type [KO:K00163] [EC:1.2.4.1]
Franean1_1779  2-oxoglutarate dehydrogenase E2 component [KO:K00627] [EC:2.3.1.12]
Franean1_5475  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Franean1_1780  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Franean1_6077  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Franean1_6867  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Franean1_6078  thiamine pyrophosphate protein domain protein TPP-binding [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Franean1_6866  thiamine pyrophosphate protein domain protein TPP-binding [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Franean1_6841  Alcohol dehydrogenase zinc-binding domain protein [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Franean1_6571  Alcohol dehydrogenase zinc-binding type 2 [KO:K13953] [EC:1.1.1.1]
Franean1_4527  Alcohol dehydrogenase GroES domain protein [KO:K13979] [EC:1.1.1.2]
Franean1_4287  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_6857  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_7185  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_3699  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_4733  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_4526  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_0346  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_1787  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_2715  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_3281  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_4515  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_4456  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_4593  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_6855  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_5389  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_0618  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Franean1_3235  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Franean1_1068  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Franean1_5250  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Franean1_1252  Polyphosphate--glucose phosphotransferase [KO:K00886] [EC:2.7.1.63]
Franean1_0833  Phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Franean1_4382  Phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
fre00020  Citrate cycle (TCA cycle)
fre00030  Pentose phosphate pathway
fre00500  Starch and sucrose metabolism
fre00620  Pyruvate metabolism
fre00640  Propanoate metabolism
fre00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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