KEGG   PATHWAY: gem00010
Entry
gem00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Geobacter sp. M21
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
gem00010  Glycolysis / Gluconeogenesis
gem00010

Module
gem_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:gem00010]
gem_M00002  Glycolysis, core module involving three-carbon compounds [PATH:gem00010]
gem_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:gem00010]
gem_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:gem00010]
Other DBs
GO: 0006096 0006094
Organism
Geobacter sp. M21 [GN:gem]
Gene
GM21_2219  glucokinase [KO:K00845] [EC:2.7.1.2]
GM21_2957  ROK family protein [KO:K25026] [EC:2.7.1.2]
GM21_3479  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
GM21_1769  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
GM21_1031  1-phosphofructokinase [KO:K16370] [EC:2.7.1.11]
GM21_1392  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
GM21_1236  phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
GM21_1808  Fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
GM21_3253  ketose-bisphosphate aldolase class-II [KO:K01624] [EC:4.1.2.13]
GM21_1882  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
GM21_3873  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
GM21_1884  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
GM21_1883  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
GM21_3570  phosphoglycerate mutase 1 family [KO:K01834] [EC:5.4.2.11]
GM21_3858  phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
GM21_2331  proposed homoserine kinase [KO:K15635] [EC:5.4.2.12]
GM21_3264  enolase [KO:K01689] [EC:4.2.1.11]
GM21_3093  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GM21_0657  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
GM21_1967  pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
GM21_0475  pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
GM21_0476  Transketolase central region [KO:K00162] [EC:1.2.4.1]
GM21_1973  Transketolase central region [KO:K00162] [EC:1.2.4.1]
GM21_1974  catalytic domain of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
GM21_0477  catalytic domain of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
GM21_3566  FAD-dependent pyridine nucleotide-disulphide oxidoreductase [KO:K00382] [EC:1.8.1.4]
GM21_0718  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
GM21_4125  pyruvate ferredoxin/flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
GM21_0192  pyruvate ferredoxin/flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
GM21_1175  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
GM21_1327  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
GM21_1176  thiamine pyrophosphate protein domain protein TPP-binding protein [KO:K00175] [EC:1.2.7.3 1.2.7.11]
GM21_1328  thiamine pyrophosphate protein domain protein TPP-binding protein [KO:K00175] [EC:1.2.7.3 1.2.7.11]
GM21_2932  iron-containing alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
GM21_0400  Alcohol dehydrogenase zinc-binding domain protein [KO:K13979] [EC:1.1.1.2]
GM21_2866  CoA-binding domain protein [KO:K24012] [EC:6.2.1.13]
GM21_2515  Aldehyde Dehydrogenase [KO:K00131] [EC:1.2.1.9]
GM21_0749  Phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
GM21_0748  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
gem00020  Citrate cycle (TCA cycle)
gem00030  Pentose phosphate pathway
gem00500  Starch and sucrose metabolism
gem00620  Pyruvate metabolism
gem00640  Propanoate metabolism
gem00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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