KEGG   PATHWAY: gya00240
Entry
gya00240                    Pathway                                
Name
Pyrimidine metabolism - Geobacillus sp. Y412MC52
Class
Metabolism; Nucleotide metabolism
Pathway map
gya00240  Pyrimidine metabolism
gya00240

Module
gya_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:gya00240]
gya_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:gya00240]
gya_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:gya00240]
Other DBs
GO: 0006220 0006213
Organism
Geobacillus sp. Y412MC52 [GN:gya]
Gene
GYMC52_0722  carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
GYMC52_1044  carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
GYMC52_3241  protein of unknown function DUF201 [KO:K01955] [EC:6.3.5.5]
GYMC52_0721  carbamoyl-phosphate synthase, small subunit [KO:K01956] [EC:6.3.5.5]
GYMC52_1043  carbamoyl-phosphate synthase, small subunit [KO:K01956] [EC:6.3.5.5]
GYMC52_1041  aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
GYMC52_1042  dihydroorotase, multifunctional complex type [KO:K01465] [EC:3.5.2.3]
GYMC52_1046  dihydroorotate dehydrogenase family protein [KO:K17828] [EC:1.3.1.14]
GYMC52_1045  oxidoreductase FAD/NAD(P)-binding domain protein [KO:K02823]
GYMC52_1048  orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
GYMC52_1047  orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
GYMC52_1158  uridylate kinase [KO:K09903] [EC:2.7.4.22]
GYMC52_2191  Nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
GYMC52_2655  maf protein [KO:K06287] [EC:3.6.1.-]
GYMC52_3478  CTP synthase [KO:K01937] [EC:6.3.4.2]
GYMC52_2209  cytidylate kinase [KO:K00945] [EC:2.7.4.25]
GYMC52_2582  uridine kinase [KO:K00876] [EC:2.7.1.48]
GYMC52_3083  metallophosphoesterase [KO:K01081] [EC:3.1.3.5]
GYMC52_3455  uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
GYMC52_1039  Uracil phosphoribosyltransferase [KO:K02825] [EC:2.4.2.9]
GYMC52_3304  5'-Nucleotidase domain-containing protein [KO:K01119] [EC:3.1.4.16 3.1.3.6]
GYMC52_1211  metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
GYMC52_1291  Indigoidine synthase A family protein [KO:K16329] [EC:4.2.1.70]
GYMC52_2292  pyrimidine-nucleoside phosphorylase [KO:K00756] [EC:2.4.2.2]
GYMC52_2523  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
GYMC52_0826  ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
GYMC52_2444  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
GYMC52_2807  ribonucleotide reductase [KO:K00526] [EC:1.17.4.1]
GYMC52_0827  ribonucleotide reductase [KO:K00526] [EC:1.17.4.1]
GYMC52_2550  ComE operon protein 2 [KO:K01493] [EC:3.5.4.12]
GYMC52_0024  thymidylate kinase [KO:K00943] [EC:2.7.4.9]
GYMC52_3469  Thymidine kinase [KO:K00857] [EC:2.7.1.21]
GYMC52_1720  thymidylate synthase [KO:K00560] [EC:2.1.1.45]
GYMC52_1340  FAD-dependent pyridine nucleotide-disulfide oxidoreductase [KO:K17722] [EC:1.3.1.1]
GYMC52_1341  dihydroorotate dehydrogenase family protein [KO:K17723] [EC:1.3.1.1]
GYMC52_1342  dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
GYMC52_1339  Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
Related
pathway
gya00030  Pentose phosphate pathway
gya00220  Arginine biosynthesis
gya00250  Alanine, aspartate and glutamate metabolism
gya00280  Valine, leucine and isoleucine degradation
gya00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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