KEGG   PATHWAY: ipu00512
Entry
ipu00512                    Pathway                                
Name
Mucin type O-glycan biosynthesis - Ictalurus punctatus (channel catfish)
Description
O-glycans are a class of glycans that modify serine or threonine residues of proteins. Biosynthesis of O-glycans starts from the transfer of N-acetylgalactosamine (GalNAc) to serine or threonine. The first GalNAc may be extended with sugars including galactose, N-acetylglucosamine, fucose, or sialic acid, but not mannose, glucose, or xylose. Depending on the sugars added, there are four common O-glycan core structures, cores 1 through 4, and an additional four, cores 5 though 8. Mucins are highly O-glycosylated glycoproteins ubiquitous in mucous secretions on cell surfaces and in body fluids. Mucin O-glycans can be branched, and many sugars or groups of sugars are antigenic. Important modifications of mucin O-glycans include O-acetylation of sialic acid and O-sulfation of galactose and N-acetylglucosamine.
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
ipu00512  Mucin type O-glycan biosynthesis
ipu00512

Other DBs
GO: 0006493
Organism
Ictalurus punctatus (channel catfish) [GN:ipu]
Gene
108268488  galnt18a; polypeptide N-acetylgalactosaminyltransferase 18a [KO:K00710] [EC:2.4.1.41]
108277418  galnt17; polypeptide N-acetylgalactosaminyltransferase 17 [KO:K00710] [EC:2.4.1.41]
108266671  polypeptide N-acetylgalactosaminyltransferase 5 [KO:K00710] [EC:2.4.1.41]
108274857  galnt14; polypeptide N-acetylgalactosaminyltransferase 14 [KO:K00710] [EC:2.4.1.41]
108263408  polypeptide N-acetylgalactosaminyltransferase 2 isoform X1 [KO:K00710] [EC:2.4.1.41]
108266796  polypeptide N-acetylgalactosaminyltransferase 3 [KO:K00710] [EC:2.4.1.41]
108271241  galnt18b; polypeptide N-acetylgalactosaminyltransferase 18 isoform X1 [KO:K00710] [EC:2.4.1.41]
108263018  N-acetylgalactosaminyltransferase 7 isoform X1 [KO:K00710] [EC:2.4.1.41]
108276041  galnt6; polypeptide N-acetylgalactosaminyltransferase 6 [KO:K00710] [EC:2.4.1.41]
108270484  polypeptide N-acetylgalactosaminyltransferase 16 [KO:K00710] [EC:2.4.1.41]
108266119  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1 [KO:K00710] [EC:2.4.1.41]
108268951  LOW QUALITY PROTEIN: probable polypeptide N-acetylgalactosaminyltransferase 8 [KO:K00710] [EC:2.4.1.41]
108268952  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X1 [KO:K00710] [EC:2.4.1.41]
108273034  polypeptide N-acetylgalactosaminyltransferase 11 [KO:K00710] [EC:2.4.1.41]
108278851  polypeptide N-acetylgalactosaminyltransferase 10 isoform X1 [KO:K00710] [EC:2.4.1.41]
108255959  polypeptide N-acetylgalactosaminyltransferase 9 [KO:K00710] [EC:2.4.1.41]
108257091  polypeptide N-acetylgalactosaminyltransferase 12 [KO:K00710] [EC:2.4.1.41]
108257092  poc1bl; polypeptide N-acetylgalactosaminyltransferase 4 [KO:K00710] [EC:2.4.1.41]
108263446  polypeptide N-acetylgalactosaminyltransferase-like 6 [KO:K00710] [EC:2.4.1.41]
108256421  polypeptide N-acetylgalactosaminyltransferase 1 [KO:K00710] [EC:2.4.1.41]
108276279  c1galt1la; glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A isoform X1 [KO:K00731] [EC:2.4.1.122]
108272220  c1galt1lb; glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B [KO:K00731] [EC:2.4.1.122]
108269324  C1GALT1-specific chaperone 1 [KO:K09653]
108265617  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [KO:K00727] [EC:2.4.1.102]
108274561  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 [KO:K09662] [EC:2.4.1.-]
124627616  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 [KO:K09662] [EC:2.4.1.-]
108279144  gcnt4b.2; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 [KO:K09663] [EC:2.4.1.-]
108255765  gcnt4a; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 [KO:K09663] [EC:2.4.1.-]
108274832  CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1 [KO:K00780] [EC:2.4.3.2 2.4.3.4]
108264596  CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 2 [KO:K03368] [EC:2.4.3.2 2.4.3.4]
108261911  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [KO:K03479] [EC:2.4.3.3]
108262524  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like [KO:K03479] [EC:2.4.3.3]
108273438  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [KO:K03479] [EC:2.4.3.3]
128634598  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like [KO:K03479] [EC:2.4.3.3]
108273718  st6galnac; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 [KO:K06616] [EC:2.4.3.3]
108268339  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X1 [KO:K03373] [EC:2.4.3.7]
108279162  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase [KO:K03374] [EC:2.4.3.7]
108265513  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3 isoform X1 [KO:K07970] [EC:2.4.1.146 2.4.1.149]
108265849  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3 isoform X1 [KO:K07970] [EC:2.4.1.146 2.4.1.149]
108266016  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3 [KO:K07970] [EC:2.4.1.146 2.4.1.149]
108266017  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3 isoform X1 [KO:K07970] [EC:2.4.1.146 2.4.1.149]
128632865  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like [KO:K07970] [EC:2.4.1.146 2.4.1.149]
108265514  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3 isoform X1 [KO:K07970] [EC:2.4.1.146 2.4.1.149]
108276341  b4galt5; beta-1,4-galactosyltransferase 5 isoform X1 [KO:K09905] [EC:2.4.1.274 2.4.1.-]
Compound
C02189  [Protein]-L-serine
G00023  Tn antigen
G00024  Thomsen-Friedenreich antigen
G00025   
G00026  Sialyl T antigen
G00027   
G00028   
G00029   
G00030   
G00031   
G00032   
G00033   
G00034   
G00035  Sialyl-Tn antigen
G10611  UDP-N-acetyl-D-galactosamine
G10794   
G13153   
Reference
  Authors
Brockhausen I.
  Title
Pathways of O-glycan biosynthesis in cancer cells.
  Journal
Biochim Biophys Acta 1473:67-95 (1999)
DOI:10.1016/S0304-4165(99)00170-1
Reference
  Authors
Iwai T, Inaba N, Naundorf A, Zhang Y, Gotoh M, Iwasaki H, Kudo T, Togayachi A, Ishizuka Y, Nakanishi H, Narimatsu H.
  Title
Molecular cloning and characterization of a novel UDP-GlcNAc:GalNAc-peptide beta1,3-N-acetylglucosaminyltransferase (beta 3Gn-T6), an enzyme synthesizing the core 3 structure of O-glycans.
  Journal
J Biol Chem 277:12802-9 (2002)
DOI:10.1074/jbc.M112457200
Reference
  Authors
Korekane H, Taguchi T, Sakamoto Y, Honke K, Dohmae N, Salminen H, Toivonen S, Helin J, Takio K, Renkonen O, Taniguchi N.
  Title
Purification and cDNA cloning of UDP-GlcNAc:GlcNAcbeta1-3Galbeta1-4Glc(NAc)-R [GlcNAc to Gal]beta1,6N-acetylglucosaminyltransferase from rat small intestine: a major carrier of dIGnT activity in rat small intestine.
  Journal
Glycobiology 13:387-400 (2003)
DOI:10.1093/glycob/cwg044
Reference
  Authors
van Die I, van Tetering A, Schiphorst WE, Sato T, Furukawa K, van den Eijnden DH.
  Title
The acceptor substrate specificity of human beta4-galactosyltransferase V indicates its potential function in O-glycosylation.
  Journal
FEBS Lett 450:52-6 (1999)
DOI:10.1016/S0014-5793(99)00462-7
Reference
  Authors
Marcos NT, Pinho S, Grandela C, Cruz A, Samyn-Petit B, Harduin-Lepers A, Almeida R, Silva F, Morais V, Costa J, Kihlberg J, Clausen H, Reis CA
  Title
Role of the human ST6GalNAc-I and ST6GalNAc-II in the synthesis of the cancer-associated sialyl-Tn antigen.
  Journal
Cancer Res 64:7050-7 (2004)
DOI:10.1158/0008-5472.CAN-04-1921
Reference
  Authors
Lee YC, Kaufmann M, Kitazume-Kawaguchi S, Kono M, Takashima S, Kurosawa N, Liu H, Pircher H, Tsuji S
  Title
Molecular cloning and functional expression of two members of mouse NeuAcalpha2,3Galbeta1,3GalNAc GalNAcalpha2,6-sialyltransferase family, ST6GalNAc  III and IV.
  Journal
J Biol Chem 274:11958-67 (1999)
DOI:10.1074/jbc.274.17.11958
Reference
  Authors
Kudelka MR, Ju T, Heimburg-Molinaro J, Cummings RD
  Title
Simple sugars to complex disease--mucin-type O-glycans in cancer.
  Journal
Adv Cancer Res 126:53-135 (2015)
DOI:10.1016/bs.acr.2014.11.002
Reference
  Authors
Yeh JC, Hiraoka N, Petryniak B, Nakayama J, Ellies LG, Rabuka D, Hindsgaul O, Marth JD, Lowe JB, Fukuda M
  Title
Novel sulfated lymphocyte homing receptors and their control by a Core1 extension beta 1,3-N-acetylglucosaminyltransferase.
  Journal
Cell 105:957-69 (2001)
DOI:10.1016/S0092-8674(01)00394-4
Related
pathway
ipu00533  Glycosaminoglycan biosynthesis - keratan sulfate
KO pathway
ko00512   
LinkDB

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