KEGG   PATHWAY: liu00010
Entry
liu00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Lysinibacillus irui
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
liu00010  Glycolysis / Gluconeogenesis
liu00010

Module
liu_M00002  Glycolysis, core module involving three-carbon compounds [PATH:liu00010]
liu_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:liu00010]
liu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:liu00010]
Other DBs
GO: 0006096 0006094
Organism
Lysinibacillus irui [GN:liu]
Gene
OU989_03060  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
OU989_16420  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
OU989_02490  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
OU989_02475  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
OU989_18260  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
OU989_18275  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
OU989_16330  glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
OU989_18265  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
OU989_20855  histidine phosphatase family protein [KO:K01834] [EC:5.4.2.11]
OU989_10150  histidine phosphatase family protein [KO:K01834] [EC:5.4.2.11]
OU989_18255  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
OU989_18250  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
OU989_16415  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
OU989_03850  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
OU989_03855  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
OU989_03860  dihydrolipoamide acetyltransferase family protein [KO:K00627] [EC:2.3.1.12]
OU989_03865  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
OU989_13790  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
OU989_05190  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
OU989_05195  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
OU989_17875  glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
OU989_16570  iron-containing alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
OU989_07885  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
OU989_03480  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
OU989_21880  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
OU989_16500  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
OU989_16615  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
OU989_21415  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
OU989_03065  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
OU989_16900  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
liu00020  Citrate cycle (TCA cycle)
liu00030  Pentose phosphate pathway
liu00500  Starch and sucrose metabolism
liu00620  Pyruvate metabolism
liu00640  Propanoate metabolism
liu00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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