KEGG   PATHWAY: lpg02010
Entry
lpg02010                    Pathway                                
Name
ABC transporters - Lactiplantibacillus pentosus
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
lpg02010  ABC transporters
lpg02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Lactiplantibacillus pentosus [GN:lpg]
Gene
BB562_14415  ABC transporter [KO:K15553]
BB562_14410  ABC transporter permease [KO:K15554]
BB562_14405  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
BB562_08675  iron ABC transporter substrate-binding protein [KO:K02012]
BB562_08680  iron ABC transporter permease [KO:K02011]
BB562_08670  iron ABC transporter ATP-binding protein [KO:K02010] [EC:7.2.2.7]
BB562_01440  spermidine/putrescine ABC transporter substrate-binding protein [KO:K11069]
BB562_01445  spermidine/putrescine ABC transporter permease PotC [KO:K11070]
BB562_01450  spermidine/putrescine ABC transporter permease [KO:K11071]
BB562_01455  spermidine/putrescine ABC transporter ATP-binding protein [KO:K11072] [EC:7.6.2.11]
BB562_09380  glycine/betaine ABC transporter substrate-binding protein [KO:K05845]
BB562_07950  glycine/betaine ABC transporter permease [KO:K05845 K05846]
BB562_01690  glycine/betaine ABC transporter permease [KO:K05845 K05846]
BB562_09375  amino acid ABC transporter permease [KO:K05846]
BB562_09385  choline ABC transporter permease [KO:K05846]
BB562_09390  glycine/betaine ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
BB562_07945  proline/glycine betaine ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
BB562_01695  ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
BB562_16105  sugar ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
BB562_00790  sugar ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
BB562_16135  sugar ABC transporter substrate-binding protein [KO:K17318]
BB562_16145  sugar ABC transporter permease [KO:K17319]
BB562_16140  sugar ABC transporter permease [KO:K17320]
BB562_16205  D-ribose pyranase [KO:K06726] [EC:5.4.99.62]
BB562_10805  glycerol-3-phosphate ABC transporter substrate-binding protein [KO:K05813]
BB562_10815  glycerol-3-phosphate ABC transporter permease [KO:K05814]
BB562_10810  glycerol-3-phosphate ABC transporter permease [KO:K05815]
BB562_10820  glycerol-3-phosphate ABC transporter ATP-binding protein [KO:K05816] [EC:7.6.2.10]
BB562_13370  phosphate ABC transporter substrate-binding protein [KO:K02040]
BB562_13420  phosphate ABC transporter substrate-binding protein [KO:K02040]
BB562_13365  phosphate ABC transporter permease subunit PstC [KO:K02037]
BB562_13360  phosphate ABC transporter, permease protein PstA [KO:K02038]
BB562_13350  phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
BB562_13355  phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
BB562_13490  phosphonate ABC transporter, permease protein PhnE [KO:K02042]
BB562_13495  ABC transporter permease [KO:K02042]
BB562_13485  phosphonate ABC transporter ATP-binding protein [KO:K02041] [EC:7.3.2.2]
BB562_13045  glutamine ABC transporter substrate-binding protein [KO:K10036 K10037]
BB562_13040  peptide ABC transporter ATP-binding protein [KO:K10038] [EC:7.4.2.1]
BB562_12700  glutamine ABC transporter substrate-binding protein [KO:K10039]
BB562_12690  glutamine ABC transporter permease [KO:K10040]
BB562_12695  glutamine ABC transporter permease [KO:K10040]
BB562_12705  amino acid ABC transporter ATP-binding protein [KO:K10041] [EC:7.4.2.1]
BB562_14710  amino acid ABC transporter substrate-binding protein [KO:K02424]
BB562_14725  amino acid ABC transporter substrate-binding protein [KO:K02424]
BB562_14715  cysteine ABC transporter permease [KO:K10009]
BB562_14720  arginine ABC transporter ATP-binding protein ArtP [KO:K10010] [EC:7.4.2.1]
BB562_06955  ABC transporter permease [KO:K17077 K23059]
BB562_06960  glnQ; glutamine ABC transporter ATP-binding protein [KO:K23060] [EC:7.4.2.1]
BB562_02925  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
BB562_02930  ABC transporter permease [KO:K01997]
BB562_02935  branched-chain amino acid ABC transporter permease [KO:K01998]
BB562_02940  ABC transporter ATP-binding protein [KO:K01995]
BB562_02945  ABC transporter ATP-binding protein [KO:K01996]
BB562_05760  methionine ABC transporter substrate-binding protein [KO:K02073]
BB562_08690  metal ABC transporter substrate-binding protein [KO:K02073]
BB562_05755  methionine ABC transporter permease [KO:K02072]
BB562_08695  methionine ABC transporter permease [KO:K02072]
BB562_01570  methionine ABC transporter permease [KO:K02072]
BB562_05750  methionine ABC transporter ATP-binding protein [KO:K02071]
BB562_08700  phosphate ABC transporter ATP-binding protein [KO:K02071]
BB562_01565  methionine ABC transporter ATP-binding protein [KO:K02071]
BB562_11150  peptide ABC transporter substrate-binding protein [KO:K15580]
BB562_13135  peptide ABC transporter substrate-binding protein [KO:K15580]
BB562_14360  peptide ABC transporter substrate-binding protein [KO:K15580]
BB562_16315  ABC transporter substrate-binding protein [KO:K15580]
BB562_14955  peptide-binding protein [KO:K15580]
BB562_00860  peptide ABC transporter substrate-binding protein [KO:K15580]
BB562_00080  peptide ABC transporter substrate-binding protein [KO:K15580]
BB562_00395  peptide ABC transporter substrate-binding protein [KO:K15580]
BB562_00855  peptide ABC transporter substrate-binding protein [KO:K15580]
BB562_01845  hypothetical protein [KO:K15580]
BB562_11145  peptide ABC transporter permease [KO:K15581]
BB562_14950  peptide ABC transporter permease [KO:K15581]
BB562_01850  peptide ABC transporter permease [KO:K15581]
BB562_11140  peptide ABC transporter permease [KO:K15582]
BB562_01855  peptide ABC transporter permease [KO:K15582]
BB562_11135  peptide ABC transporter ATP-binding protein [KO:K15583]
BB562_14940  oligopeptide transport ATP-binding protein AmiE [KO:K15583]
BB562_01860  oligopeptide transport ATP-binding protein AmiE [KO:K15583]
BB562_11130  peptide ABC transporter substrate-binding protein [KO:K10823]
BB562_14935  peptide ABC transporter ATP-binding protein [KO:K10823]
BB562_01865  peptide ABC transporter ATP-binding protein [KO:K10823]
BB562_11820  manganese ABC transporter substrate-binding protein [KO:K19975]
BB562_11825  hypothetical protein [KO:K19976]
BB562_11830  manganese ABC transporter ATP-binding protein [KO:K19973] [EC:7.2.2.5]
BB562_00425  cobalamin biosynthesis protein CbiM [KO:K02007]
BB562_00420  cobalt ABC transporter permease [KO:K02008]
BB562_00415  cobalt ABC transporter [KO:K02006]
BB562_00880  hypothetical protein [KO:K02006]
BB562_11930  cobalt ABC transporter ATP-binding protein [KO:K16785]
BB562_00935  ABC transporter permease [KO:K16785]
BB562_11940  energy-coupling factor transporter ATPase [KO:K16786] [EC:7.-.-.-]
BB562_11935  energy-coupling factor ABC transporter ATP-binding protein [KO:K16787] [EC:7.-.-.-]
BB562_06650  multidrug ABC transporter permease [KO:K11051]
BB562_06645  ABC transporter ATP-binding protein [KO:K11050]
BB562_01595  Teichoic acid translocation permease TagG [KO:K09692]
BB562_01600  teichoic acid ABC transporter ATP-binding protein [KO:K09693] [EC:7.5.2.4]
BB562_01505  acetoin ABC transporter permease [KO:K16919]
BB562_01500  multidrug ABC transporter [KO:K16921]
BB562_07805  multidrug ABC transporter [KO:K16921]
BB562_16160  multidrug ABC transporter ATP-binding protein [KO:K18889]
BB562_16165  multidrug ABC transporter ATP-binding protein [KO:K18890]
BB562_05210  multidrug DMT transporter permease [KO:K18104] [EC:7.6.2.2]
BB562_02745  multidrug ABC transporter ATP-binding protein [KO:K18891]
BB562_02750  multidrug ABC transporter permease [KO:K18892]
BB562_05585  multidrug ABC transporter ATP-binding protein [KO:K18887]
BB562_04845  multidrug ABC transporter permease [KO:K18887]
BB562_04850  multidrug ABC transporter ATP-binding protein [KO:K18888]
BB562_05590  multidrug ABC transporter ATP-binding protein [KO:K18888]
BB562_11690  thiol reductant ABC exporter subunit CydC [KO:K16012]
BB562_11695  thiol reductant ABC exporter subunit CydD [KO:K16013]
BB562_00930  ABC transporter ATP-binding protein [KO:K18231]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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