KEGG   PATHWAY: lvr01100
Entry
lvr01100                    Pathway                                
Name
Metabolic pathways - Limimaricola variabilis
Class
Pathway map
lvr01100  Metabolic pathways
lvr01100

Module
lvr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lvr01100]
lvr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lvr01100]
lvr_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:lvr01100]
lvr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lvr01100]
lvr_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:lvr01100]
lvr_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lvr01100]
lvr_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:lvr01100]
lvr_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:lvr01100]
lvr_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lvr01100]
lvr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lvr01100]
lvr_M00012  Glyoxylate cycle [PATH:lvr01100]
lvr_M00015  Proline biosynthesis, glutamate => proline [PATH:lvr01100]
lvr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:lvr01100]
lvr_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:lvr01100]
lvr_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:lvr01100]
lvr_M00021  Cysteine biosynthesis, serine => cysteine [PATH:lvr01100]
lvr_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:lvr01100]
lvr_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:lvr01100]
lvr_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:lvr01100]
lvr_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:lvr01100]
lvr_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:lvr01100]
lvr_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:lvr01100]
lvr_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:lvr01100]
lvr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lvr01100]
lvr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lvr01100]
lvr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lvr01100]
lvr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lvr01100]
lvr_M00082  Fatty acid biosynthesis, initiation [PATH:lvr01100]
lvr_M00083  Fatty acid biosynthesis, elongation [PATH:lvr01100]
lvr_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:lvr01100]
lvr_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:lvr01100]
lvr_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:lvr01100]
lvr_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:lvr01100]
lvr_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:lvr01100]
lvr_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:lvr01100]
lvr_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:lvr01100]
lvr_M00140  C1-unit interconversion, prokaryotes [PATH:lvr01100]
lvr_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:lvr01100]
lvr_M00149  Succinate dehydrogenase, prokaryotes [PATH:lvr01100]
lvr_M00151  Cytochrome bc1 complex respiratory unit [PATH:lvr01100]
lvr_M00155  Cytochrome c oxidase, prokaryotes [PATH:lvr01100]
lvr_M00156  Cytochrome c oxidase, cbb3-type [PATH:lvr01100]
lvr_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:lvr01100]
lvr_M00169  CAM (Crassulacean acid metabolism), light [PATH:lvr01100]
lvr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lvr01100]
lvr_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:lvr01100]
lvr_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:lvr01100]
lvr_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:lvr01100]
lvr_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:lvr01100]
lvr_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:lvr01100]
lvr_M00555  Betaine biosynthesis, choline => betaine [PATH:lvr01100]
lvr_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:lvr01100]
lvr_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:lvr01100]
lvr_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:lvr01100]
lvr_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:lvr01100]
lvr_M00621  Glycine cleavage system [PATH:lvr01100]
lvr_M00623  Phthalate degradation, phthalate => protocatechuate [PATH:lvr01100]
lvr_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:lvr01100]
lvr_M00793  dTDP-L-rhamnose biosynthesis [PATH:lvr01100]
lvr_M00844  Arginine biosynthesis, ornithine => arginine [PATH:lvr01100]
lvr_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:lvr01100]
lvr_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lvr01100]
lvr_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:lvr01100]
lvr_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:lvr01100]
lvr_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:lvr01100]
lvr_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:lvr01100]
lvr_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:lvr01100]
lvr_M00970  Proline degradation, proline => glutamate [PATH:lvr01100]
Organism
Limimaricola variabilis [GN:lvr]
Related
pathway
lvr00010  Glycolysis / Gluconeogenesis
lvr00020  Citrate cycle (TCA cycle)
lvr00030  Pentose phosphate pathway
lvr00040  Pentose and glucuronate interconversions
lvr00051  Fructose and mannose metabolism
lvr00052  Galactose metabolism
lvr00053  Ascorbate and aldarate metabolism
lvr00061  Fatty acid biosynthesis
lvr00071  Fatty acid degradation
lvr00121  Secondary bile acid biosynthesis
lvr00130  Ubiquinone and other terpenoid-quinone biosynthesis
lvr00190  Oxidative phosphorylation
lvr00220  Arginine biosynthesis
lvr00230  Purine metabolism
lvr00240  Pyrimidine metabolism
lvr00250  Alanine, aspartate and glutamate metabolism
lvr00260  Glycine, serine and threonine metabolism
lvr00261  Monobactam biosynthesis
lvr00270  Cysteine and methionine metabolism
lvr00280  Valine, leucine and isoleucine degradation
lvr00290  Valine, leucine and isoleucine biosynthesis
lvr00300  Lysine biosynthesis
lvr00310  Lysine degradation
lvr00330  Arginine and proline metabolism
lvr00332  Carbapenem biosynthesis
lvr00340  Histidine metabolism
lvr00350  Tyrosine metabolism
lvr00360  Phenylalanine metabolism
lvr00361  Chlorocyclohexane and chlorobenzene degradation
lvr00362  Benzoate degradation
lvr00364  Fluorobenzoate degradation
lvr00380  Tryptophan metabolism
lvr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
lvr00401  Novobiocin biosynthesis
lvr00410  beta-Alanine metabolism
lvr00430  Taurine and hypotaurine metabolism
lvr00450  Selenocompound metabolism
lvr00460  Cyanoamino acid metabolism
lvr00470  D-Amino acid metabolism
lvr00480  Glutathione metabolism
lvr00500  Starch and sucrose metabolism
lvr00520  Amino sugar and nucleotide sugar metabolism
lvr00521  Streptomycin biosynthesis
lvr00523  Polyketide sugar unit biosynthesis
lvr00525  Acarbose and validamycin biosynthesis
lvr00540  Lipopolysaccharide biosynthesis
lvr00541  O-Antigen nucleotide sugar biosynthesis
lvr00543  Exopolysaccharide biosynthesis
lvr00550  Peptidoglycan biosynthesis
lvr00552  Teichoic acid biosynthesis
lvr00561  Glycerolipid metabolism
lvr00562  Inositol phosphate metabolism
lvr00564  Glycerophospholipid metabolism
lvr00600  Sphingolipid metabolism
lvr00620  Pyruvate metabolism
lvr00622  Xylene degradation
lvr00623  Toluene degradation
lvr00624  Polycyclic aromatic hydrocarbon degradation
lvr00625  Chloroalkane and chloroalkene degradation
lvr00626  Naphthalene degradation
lvr00627  Aminobenzoate degradation
lvr00630  Glyoxylate and dicarboxylate metabolism
lvr00633  Nitrotoluene degradation
lvr00640  Propanoate metabolism
lvr00643  Styrene degradation
lvr00650  Butanoate metabolism
lvr00660  C5-Branched dibasic acid metabolism
lvr00670  One carbon pool by folate
lvr00680  Methane metabolism
lvr00710  Carbon fixation by Calvin cycle
lvr00720  Other carbon fixation pathways
lvr00730  Thiamine metabolism
lvr00740  Riboflavin metabolism
lvr00750  Vitamin B6 metabolism
lvr00760  Nicotinate and nicotinamide metabolism
lvr00770  Pantothenate and CoA biosynthesis
lvr00780  Biotin metabolism
lvr00785  Lipoic acid metabolism
lvr00790  Folate biosynthesis
lvr00791  Atrazine degradation
lvr00860  Porphyrin metabolism
lvr00900  Terpenoid backbone biosynthesis
lvr00906  Carotenoid biosynthesis
lvr00907  Pinene, camphor and geraniol degradation
lvr00910  Nitrogen metabolism
lvr00920  Sulfur metabolism
lvr00930  Caprolactam degradation
lvr00946  Degradation of flavonoids
lvr00999  Biosynthesis of various plant secondary metabolites
lvr01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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