KEGG   PATHWAY: lyb01100
Entry
lyb01100                    Pathway                                
Name
Metabolic pathways - Lysinibacillus sp. B2A1
Class
Pathway map
lyb01100  Metabolic pathways
lyb01100

Module
lyb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lyb01100]
lyb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lyb01100]
lyb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lyb01100]
lyb_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lyb01100]
lyb_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:lyb01100]
lyb_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lyb01100]
lyb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lyb01100]
lyb_M00012  Glyoxylate cycle [PATH:lyb01100]
lyb_M00015  Proline biosynthesis, glutamate => proline [PATH:lyb01100]
lyb_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:lyb01100]
lyb_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:lyb01100]
lyb_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:lyb01100]
lyb_M00021  Cysteine biosynthesis, serine => cysteine [PATH:lyb01100]
lyb_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:lyb01100]
lyb_M00026  Histidine biosynthesis, PRPP => histidine [PATH:lyb01100]
lyb_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:lyb01100]
lyb_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:lyb01100]
lyb_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:lyb01100]
lyb_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lyb01100]
lyb_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lyb01100]
lyb_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lyb01100]
lyb_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lyb01100]
lyb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lyb01100]
lyb_M00082  Fatty acid biosynthesis, initiation [PATH:lyb01100]
lyb_M00083  Fatty acid biosynthesis, elongation [PATH:lyb01100]
lyb_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:lyb01100]
lyb_M00087  beta-Oxidation [PATH:lyb01100]
lyb_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:lyb01100]
lyb_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:lyb01100]
lyb_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:lyb01100]
lyb_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:lyb01100]
lyb_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:lyb01100]
lyb_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:lyb01100]
lyb_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:lyb01100]
lyb_M00140  C1-unit interconversion, prokaryotes [PATH:lyb01100]
lyb_M00151  Cytochrome bc1 complex respiratory unit [PATH:lyb01100]
lyb_M00155  Cytochrome c oxidase, prokaryotes [PATH:lyb01100]
lyb_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:lyb01100]
lyb_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:lyb01100]
lyb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lyb01100]
lyb_M00416  Cytochrome aa3-600 menaquinol oxidase [PATH:lyb01100]
lyb_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:lyb01100]
lyb_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:lyb01100]
lyb_M00569  Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA [PATH:lyb01100]
lyb_M00621  Glycine cleavage system [PATH:lyb01100]
lyb_M00844  Arginine biosynthesis, ornithine => arginine [PATH:lyb01100]
lyb_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:lyb01100]
lyb_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:lyb01100]
lyb_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:lyb01100]
lyb_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:lyb01100]
lyb_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:lyb01100]
lyb_M00949  Staphylopine biosynthesis, L-histidine => staphylopine [PATH:lyb01100]
lyb_M00970  Proline degradation, proline => glutamate [PATH:lyb01100]
lyb_M00972  Proline metabolism [PATH:lyb01100]
Organism
Lysinibacillus sp. B2A1 [GN:lyb]
Related
pathway
lyb00010  Glycolysis / Gluconeogenesis
lyb00020  Citrate cycle (TCA cycle)
lyb00030  Pentose phosphate pathway
lyb00040  Pentose and glucuronate interconversions
lyb00051  Fructose and mannose metabolism
lyb00052  Galactose metabolism
lyb00061  Fatty acid biosynthesis
lyb00062  Fatty acid elongation
lyb00071  Fatty acid degradation
lyb00100  Steroid biosynthesis
lyb00130  Ubiquinone and other terpenoid-quinone biosynthesis
lyb00190  Oxidative phosphorylation
lyb00220  Arginine biosynthesis
lyb00230  Purine metabolism
lyb00240  Pyrimidine metabolism
lyb00250  Alanine, aspartate and glutamate metabolism
lyb00260  Glycine, serine and threonine metabolism
lyb00261  Monobactam biosynthesis
lyb00270  Cysteine and methionine metabolism
lyb00280  Valine, leucine and isoleucine degradation
lyb00290  Valine, leucine and isoleucine biosynthesis
lyb00300  Lysine biosynthesis
lyb00310  Lysine degradation
lyb00311  Penicillin and cephalosporin biosynthesis
lyb00330  Arginine and proline metabolism
lyb00332  Carbapenem biosynthesis
lyb00340  Histidine metabolism
lyb00350  Tyrosine metabolism
lyb00360  Phenylalanine metabolism
lyb00361  Chlorocyclohexane and chlorobenzene degradation
lyb00362  Benzoate degradation
lyb00380  Tryptophan metabolism
lyb00400  Phenylalanine, tyrosine and tryptophan biosynthesis
lyb00401  Novobiocin biosynthesis
lyb00410  beta-Alanine metabolism
lyb00430  Taurine and hypotaurine metabolism
lyb00440  Phosphonate and phosphinate metabolism
lyb00450  Selenocompound metabolism
lyb00460  Cyanoamino acid metabolism
lyb00470  D-Amino acid metabolism
lyb00480  Glutathione metabolism
lyb00500  Starch and sucrose metabolism
lyb00520  Amino sugar and nucleotide sugar metabolism
lyb00521  Streptomycin biosynthesis
lyb00523  Polyketide sugar unit biosynthesis
lyb00525  Acarbose and validamycin biosynthesis
lyb00540  Lipopolysaccharide biosynthesis
lyb00541  O-Antigen nucleotide sugar biosynthesis
lyb00542  O-Antigen repeat unit biosynthesis
lyb00543  Exopolysaccharide biosynthesis
lyb00550  Peptidoglycan biosynthesis
lyb00552  Teichoic acid biosynthesis
lyb00561  Glycerolipid metabolism
lyb00562  Inositol phosphate metabolism
lyb00564  Glycerophospholipid metabolism
lyb00592  alpha-Linolenic acid metabolism
lyb00620  Pyruvate metabolism
lyb00621  Dioxin degradation
lyb00622  Xylene degradation
lyb00625  Chloroalkane and chloroalkene degradation
lyb00626  Naphthalene degradation
lyb00627  Aminobenzoate degradation
lyb00630  Glyoxylate and dicarboxylate metabolism
lyb00640  Propanoate metabolism
lyb00650  Butanoate metabolism
lyb00660  C5-Branched dibasic acid metabolism
lyb00670  One carbon pool by folate
lyb00680  Methane metabolism
lyb00730  Thiamine metabolism
lyb00740  Riboflavin metabolism
lyb00750  Vitamin B6 metabolism
lyb00760  Nicotinate and nicotinamide metabolism
lyb00770  Pantothenate and CoA biosynthesis
lyb00780  Biotin metabolism
lyb00785  Lipoic acid metabolism
lyb00790  Folate biosynthesis
lyb00860  Porphyrin metabolism
lyb00900  Terpenoid backbone biosynthesis
lyb00907  Pinene, camphor and geraniol degradation
lyb00909  Sesquiterpenoid and triterpenoid biosynthesis
lyb00910  Nitrogen metabolism
lyb00920  Sulfur metabolism
lyb00930  Caprolactam degradation
lyb00998  Biosynthesis of various antibiotics
lyb01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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