KEGG   PATHWAY: lyc01100
Entry
lyc01100                    Pathway                                
Name
Metabolic pathways - Lysinibacillus sp. CD3-6
Class
Pathway map
lyc01100  Metabolic pathways
lyc01100

Module
lyc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lyc01100]
lyc_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lyc01100]
lyc_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lyc01100]
lyc_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lyc01100]
lyc_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:lyc01100]
lyc_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lyc01100]
lyc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lyc01100]
lyc_M00012  Glyoxylate cycle [PATH:lyc01100]
lyc_M00015  Proline biosynthesis, glutamate => proline [PATH:lyc01100]
lyc_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:lyc01100]
lyc_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:lyc01100]
lyc_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:lyc01100]
lyc_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:lyc01100]
lyc_M00021  Cysteine biosynthesis, serine => cysteine [PATH:lyc01100]
lyc_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:lyc01100]
lyc_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:lyc01100]
lyc_M00026  Histidine biosynthesis, PRPP => histidine [PATH:lyc01100]
lyc_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:lyc01100]
lyc_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:lyc01100]
lyc_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:lyc01100]
lyc_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lyc01100]
lyc_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lyc01100]
lyc_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lyc01100]
lyc_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lyc01100]
lyc_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lyc01100]
lyc_M00082  Fatty acid biosynthesis, initiation [PATH:lyc01100]
lyc_M00083  Fatty acid biosynthesis, elongation [PATH:lyc01100]
lyc_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:lyc01100]
lyc_M00087  beta-Oxidation [PATH:lyc01100]
lyc_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:lyc01100]
lyc_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:lyc01100]
lyc_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:lyc01100]
lyc_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:lyc01100]
lyc_M00140  C1-unit interconversion, prokaryotes [PATH:lyc01100]
lyc_M00151  Cytochrome bc1 complex respiratory unit [PATH:lyc01100]
lyc_M00155  Cytochrome c oxidase, prokaryotes [PATH:lyc01100]
lyc_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:lyc01100]
lyc_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:lyc01100]
lyc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lyc01100]
lyc_M00416  Cytochrome aa3-600 menaquinol oxidase [PATH:lyc01100]
lyc_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:lyc01100]
lyc_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:lyc01100]
lyc_M00569  Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA [PATH:lyc01100]
lyc_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:lyc01100]
lyc_M00621  Glycine cleavage system [PATH:lyc01100]
lyc_M00844  Arginine biosynthesis, ornithine => arginine [PATH:lyc01100]
lyc_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:lyc01100]
lyc_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lyc01100]
lyc_M00883  Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:lyc01100]
lyc_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:lyc01100]
lyc_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:lyc01100]
lyc_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:lyc01100]
lyc_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:lyc01100]
lyc_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lyc01100]
lyc_M00970  Proline degradation, proline => glutamate [PATH:lyc01100]
lyc_M00972  Proline metabolism [PATH:lyc01100]
Organism
Lysinibacillus sp. CD3-6 [GN:lyc]
Related
pathway
lyc00010  Glycolysis / Gluconeogenesis
lyc00020  Citrate cycle (TCA cycle)
lyc00030  Pentose phosphate pathway
lyc00040  Pentose and glucuronate interconversions
lyc00051  Fructose and mannose metabolism
lyc00053  Ascorbate and aldarate metabolism
lyc00061  Fatty acid biosynthesis
lyc00062  Fatty acid elongation
lyc00071  Fatty acid degradation
lyc00100  Steroid biosynthesis
lyc00130  Ubiquinone and other terpenoid-quinone biosynthesis
lyc00190  Oxidative phosphorylation
lyc00220  Arginine biosynthesis
lyc00230  Purine metabolism
lyc00240  Pyrimidine metabolism
lyc00250  Alanine, aspartate and glutamate metabolism
lyc00260  Glycine, serine and threonine metabolism
lyc00261  Monobactam biosynthesis
lyc00270  Cysteine and methionine metabolism
lyc00280  Valine, leucine and isoleucine degradation
lyc00290  Valine, leucine and isoleucine biosynthesis
lyc00300  Lysine biosynthesis
lyc00310  Lysine degradation
lyc00311  Penicillin and cephalosporin biosynthesis
lyc00330  Arginine and proline metabolism
lyc00332  Carbapenem biosynthesis
lyc00340  Histidine metabolism
lyc00350  Tyrosine metabolism
lyc00360  Phenylalanine metabolism
lyc00361  Chlorocyclohexane and chlorobenzene degradation
lyc00362  Benzoate degradation
lyc00380  Tryptophan metabolism
lyc00400  Phenylalanine, tyrosine and tryptophan biosynthesis
lyc00401  Novobiocin biosynthesis
lyc00410  beta-Alanine metabolism
lyc00430  Taurine and hypotaurine metabolism
lyc00440  Phosphonate and phosphinate metabolism
lyc00450  Selenocompound metabolism
lyc00460  Cyanoamino acid metabolism
lyc00470  D-Amino acid metabolism
lyc00480  Glutathione metabolism
lyc00500  Starch and sucrose metabolism
lyc00511  Other glycan degradation
lyc00520  Amino sugar and nucleotide sugar metabolism
lyc00540  Lipopolysaccharide biosynthesis
lyc00541  O-Antigen nucleotide sugar biosynthesis
lyc00542  O-Antigen repeat unit biosynthesis
lyc00543  Exopolysaccharide biosynthesis
lyc00550  Peptidoglycan biosynthesis
lyc00552  Teichoic acid biosynthesis
lyc00561  Glycerolipid metabolism
lyc00562  Inositol phosphate metabolism
lyc00564  Glycerophospholipid metabolism
lyc00592  alpha-Linolenic acid metabolism
lyc00600  Sphingolipid metabolism
lyc00620  Pyruvate metabolism
lyc00621  Dioxin degradation
lyc00622  Xylene degradation
lyc00625  Chloroalkane and chloroalkene degradation
lyc00626  Naphthalene degradation
lyc00627  Aminobenzoate degradation
lyc00630  Glyoxylate and dicarboxylate metabolism
lyc00640  Propanoate metabolism
lyc00650  Butanoate metabolism
lyc00660  C5-Branched dibasic acid metabolism
lyc00670  One carbon pool by folate
lyc00680  Methane metabolism
lyc00730  Thiamine metabolism
lyc00740  Riboflavin metabolism
lyc00750  Vitamin B6 metabolism
lyc00760  Nicotinate and nicotinamide metabolism
lyc00770  Pantothenate and CoA biosynthesis
lyc00780  Biotin metabolism
lyc00785  Lipoic acid metabolism
lyc00790  Folate biosynthesis
lyc00860  Porphyrin metabolism
lyc00900  Terpenoid backbone biosynthesis
lyc00907  Pinene, camphor and geraniol degradation
lyc00909  Sesquiterpenoid and triterpenoid biosynthesis
lyc00910  Nitrogen metabolism
lyc00920  Sulfur metabolism
lyc00999  Biosynthesis of various plant secondary metabolites
KO pathway
ko01100   
LinkDB

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