PATHWAY: mmai01100 Help Entry mmai01100                   Pathway                                 Name Metabolic pathways - Methylocaldum marinum Class BRITE hierarchy Pathway map mmai01100   Metabolic pathways Module mmai_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mmai01100] mmai_M00002   Glycolysis, core module involving three-carbon compounds [PATH:mmai01100] mmai_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:mmai01100] mmai_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:mmai01100] mmai_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:mmai01100] mmai_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:mmai01100] mmai_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:mmai01100] mmai_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:mmai01100] mmai_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:mmai01100] mmai_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:mmai01100] mmai_M00015   Proline biosynthesis, glutamate => proline [PATH:mmai01100] mmai_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:mmai01100] mmai_M00021   Cysteine biosynthesis, serine => cysteine [PATH:mmai01100] mmai_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:mmai01100] mmai_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:mmai01100] mmai_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:mmai01100] mmai_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:mmai01100] mmai_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:mmai01100] mmai_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:mmai01100] mmai_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mmai01100] mmai_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mmai01100] mmai_M00063   CMP-KDO biosynthesis [PATH:mmai01100] mmai_M00082   Fatty acid biosynthesis, initiation [PATH:mmai01100] mmai_M00083   Fatty acid biosynthesis, elongation [PATH:mmai01100] mmai_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:mmai01100] mmai_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:mmai01100] mmai_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:mmai01100] mmai_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:mmai01100] mmai_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:mmai01100] mmai_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:mmai01100] mmai_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:mmai01100] mmai_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:mmai01100] mmai_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:mmai01100] mmai_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:mmai01100] mmai_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:mmai01100] mmai_M00140   C1-unit interconversion, prokaryotes [PATH:mmai01100] mmai_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:mmai01100] mmai_M00149   Succinate dehydrogenase, prokaryotes [PATH:mmai01100] mmai_M00151   Cytochrome bc1 complex respiratory unit [PATH:mmai01100] mmai_M00155   Cytochrome c oxidase, prokaryotes [PATH:mmai01100] mmai_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:mmai01100] mmai_M00174   Methane oxidation, methanotroph, methane => formaldehyde [PATH:mmai01100] mmai_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:mmai01100] mmai_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:mmai01100] mmai_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mmai01100] mmai_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:mmai01100] mmai_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:mmai01100] mmai_M00528   Nitrification, ammonia => nitrite [PATH:mmai01100] mmai_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:mmai01100] mmai_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:mmai01100] mmai_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:mmai01100] mmai_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:mmai01100] mmai_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:mmai01100] mmai_M00580   Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:mmai01100] mmai_M00621   Glycine cleavage system [PATH:mmai01100] mmai_M00793   dTDP-L-rhamnose biosynthesis [PATH:mmai01100] mmai_M00844   Arginine biosynthesis, ornithine => arginine [PATH:mmai01100] mmai_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:mmai01100] mmai_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:mmai01100] mmai_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:mmai01100] mmai_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:mmai01100] mmai_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:mmai01100] mmai_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:mmai01100] mmai_M00970   Proline degradation, proline => glutamate [PATH:mmai01100] Organism Methylocaldum marinum [GN:mmai] Related pathway mmai00010   Glycolysis / Gluconeogenesis mmai00020   Citrate cycle (TCA cycle) mmai00030   Pentose phosphate pathway mmai00040   Pentose and glucuronate interconversions mmai00051   Fructose and mannose metabolism mmai00052   Galactose metabolism mmai00053   Ascorbate and aldarate metabolism mmai00061   Fatty acid biosynthesis mmai00071   Fatty acid degradation mmai00100   Steroid biosynthesis mmai00130   Ubiquinone and other terpenoid-quinone biosynthesis mmai00190   Oxidative phosphorylation mmai00220   Arginine biosynthesis mmai00230   Purine metabolism mmai00240   Pyrimidine metabolism mmai00250   Alanine, aspartate and glutamate metabolism mmai00260   Glycine, serine and threonine metabolism mmai00261   Monobactam biosynthesis mmai00270   Cysteine and methionine metabolism mmai00280   Valine, leucine and isoleucine degradation mmai00290   Valine, leucine and isoleucine biosynthesis mmai00300   Lysine biosynthesis mmai00310   Lysine degradation mmai00311   Penicillin and cephalosporin biosynthesis mmai00330   Arginine and proline metabolism mmai00332   Carbapenem biosynthesis mmai00333   Prodigiosin biosynthesis mmai00340   Histidine metabolism mmai00350   Tyrosine metabolism mmai00360   Phenylalanine metabolism mmai00361   Chlorocyclohexane and chlorobenzene degradation mmai00362   Benzoate degradation mmai00364   Fluorobenzoate degradation mmai00380   Tryptophan metabolism mmai00400   Phenylalanine, tyrosine and tryptophan biosynthesis mmai00401   Novobiocin biosynthesis mmai00410   beta-Alanine metabolism mmai00430   Taurine and hypotaurine metabolism mmai00450   Selenocompound metabolism mmai00460   Cyanoamino acid metabolism mmai00470   D-Amino acid metabolism mmai00480   Glutathione metabolism mmai00500   Starch and sucrose metabolism mmai00520   Amino sugar and nucleotide sugar metabolism mmai00521   Streptomycin biosynthesis mmai00523   Polyketide sugar unit biosynthesis mmai00525   Acarbose and validamycin biosynthesis mmai00540   Lipopolysaccharide biosynthesis mmai00541   O-Antigen nucleotide sugar biosynthesis mmai00542   O-Antigen repeat unit biosynthesis mmai00543   Exopolysaccharide biosynthesis mmai00550   Peptidoglycan biosynthesis mmai00552   Teichoic acid biosynthesis mmai00561   Glycerolipid metabolism mmai00562   Inositol phosphate metabolism mmai00564   Glycerophospholipid metabolism mmai00565   Ether lipid metabolism mmai00592   alpha-Linolenic acid metabolism mmai00620   Pyruvate metabolism mmai00622   Xylene degradation mmai00623   Toluene degradation mmai00625   Chloroalkane and chloroalkene degradation mmai00626   Naphthalene degradation mmai00627   Aminobenzoate degradation mmai00630   Glyoxylate and dicarboxylate metabolism mmai00640   Propanoate metabolism mmai00643   Styrene degradation mmai00650   Butanoate metabolism mmai00660   C5-Branched dibasic acid metabolism mmai00670   One carbon pool by folate mmai00680   Methane metabolism mmai00710   Carbon fixation by Calvin cycle mmai00720   Other carbon fixation pathways mmai00730   Thiamine metabolism mmai00740   Riboflavin metabolism mmai00750   Vitamin B6 metabolism mmai00760   Nicotinate and nicotinamide metabolism mmai00770   Pantothenate and CoA biosynthesis mmai00780   Biotin metabolism mmai00785   Lipoic acid metabolism mmai00790   Folate biosynthesis mmai00791   Atrazine degradation mmai00860   Porphyrin metabolism mmai00900   Terpenoid backbone biosynthesis mmai00906   Carotenoid biosynthesis mmai00907   Pinene, camphor and geraniol degradation mmai00909   Sesquiterpenoid and triterpenoid biosynthesis mmai00910   Nitrogen metabolism mmai00920   Sulfur metabolism mmai00930   Caprolactam degradation mmai00946   Degradation of flavonoids mmai00999   Biosynthesis of various plant secondary metabolites mmai01040   Biosynthesis of unsaturated fatty acids mmai01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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