KEGG   PATHWAY: msa01100
Entry
msa01100                    Pathway                                
Name
Metabolic pathways - Mycobacterium sp. JS623
Class
Pathway map
msa01100  Metabolic pathways
msa01100

Module
msa_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:msa01100]
msa_M00002  Glycolysis, core module involving three-carbon compounds [PATH:msa01100]
msa_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:msa01100]
msa_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:msa01100]
msa_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:msa01100]
msa_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:msa01100]
msa_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:msa01100]
msa_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:msa01100]
msa_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:msa01100]
msa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:msa01100]
msa_M00012  Glyoxylate cycle [PATH:msa01100]
msa_M00015  Proline biosynthesis, glutamate => proline [PATH:msa01100]
msa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:msa01100]
msa_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:msa01100]
msa_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:msa01100]
msa_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:msa01100]
msa_M00026  Histidine biosynthesis, PRPP => histidine [PATH:msa01100]
msa_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:msa01100]
msa_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:msa01100]
msa_M00035  Methionine degradation [PATH:msa01100]
msa_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:msa01100]
msa_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:msa01100]
msa_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:msa01100]
msa_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:msa01100]
msa_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:msa01100]
msa_M00082  Fatty acid biosynthesis, initiation [PATH:msa01100]
msa_M00083  Fatty acid biosynthesis, elongation [PATH:msa01100]
msa_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:msa01100]
msa_M00087  beta-Oxidation [PATH:msa01100]
msa_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:msa01100]
msa_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:msa01100]
msa_M00098  Acylglycerol degradation [PATH:msa01100]
msa_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:msa01100]
msa_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:msa01100]
msa_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:msa01100]
msa_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:msa01100]
msa_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:msa01100]
msa_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:msa01100]
msa_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:msa01100]
msa_M00149  Succinate dehydrogenase, prokaryotes [PATH:msa01100]
msa_M00151  Cytochrome bc1 complex respiratory unit [PATH:msa01100]
msa_M00155  Cytochrome c oxidase, prokaryotes [PATH:msa01100]
msa_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:msa01100]
msa_M00168  CAM (Crassulacean acid metabolism), dark [PATH:msa01100]
msa_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:msa01100]
msa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:msa01100]
msa_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:msa01100]
msa_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:msa01100]
msa_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:msa01100]
msa_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:msa01100]
msa_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:msa01100]
msa_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:msa01100]
msa_M00555  Betaine biosynthesis, choline => betaine [PATH:msa01100]
msa_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:msa01100]
msa_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:msa01100]
msa_M00621  Glycine cleavage system [PATH:msa01100]
msa_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:msa01100]
msa_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:msa01100]
msa_M00793  dTDP-L-rhamnose biosynthesis [PATH:msa01100]
msa_M00844  Arginine biosynthesis, ornithine => arginine [PATH:msa01100]
msa_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:msa01100]
msa_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:msa01100]
msa_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:msa01100]
msa_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:msa01100]
msa_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:msa01100]
msa_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:msa01100]
msa_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:msa01100]
msa_M00970  Proline degradation, proline => glutamate [PATH:msa01100]
msa_M00972  Proline metabolism [PATH:msa01100]
Organism
Mycobacterium sp. JS623 [GN:msa]
Related
pathway
msa00010  Glycolysis / Gluconeogenesis
msa00020  Citrate cycle (TCA cycle)
msa00030  Pentose phosphate pathway
msa00040  Pentose and glucuronate interconversions
msa00051  Fructose and mannose metabolism
msa00052  Galactose metabolism
msa00053  Ascorbate and aldarate metabolism
msa00061  Fatty acid biosynthesis
msa00071  Fatty acid degradation
msa00100  Steroid biosynthesis
msa00121  Secondary bile acid biosynthesis
msa00130  Ubiquinone and other terpenoid-quinone biosynthesis
msa00190  Oxidative phosphorylation
msa00220  Arginine biosynthesis
msa00230  Purine metabolism
msa00240  Pyrimidine metabolism
msa00250  Alanine, aspartate and glutamate metabolism
msa00260  Glycine, serine and threonine metabolism
msa00261  Monobactam biosynthesis
msa00270  Cysteine and methionine metabolism
msa00280  Valine, leucine and isoleucine degradation
msa00290  Valine, leucine and isoleucine biosynthesis
msa00300  Lysine biosynthesis
msa00310  Lysine degradation
msa00330  Arginine and proline metabolism
msa00332  Carbapenem biosynthesis
msa00340  Histidine metabolism
msa00350  Tyrosine metabolism
msa00360  Phenylalanine metabolism
msa00361  Chlorocyclohexane and chlorobenzene degradation
msa00362  Benzoate degradation
msa00364  Fluorobenzoate degradation
msa00380  Tryptophan metabolism
msa00400  Phenylalanine, tyrosine and tryptophan biosynthesis
msa00401  Novobiocin biosynthesis
msa00405  Phenazine biosynthesis
msa00410  beta-Alanine metabolism
msa00430  Taurine and hypotaurine metabolism
msa00450  Selenocompound metabolism
msa00460  Cyanoamino acid metabolism
msa00470  D-Amino acid metabolism
msa00480  Glutathione metabolism
msa00500  Starch and sucrose metabolism
msa00514  Other types of O-glycan biosynthesis
msa00515  Mannose type O-glycan biosynthesis
msa00520  Amino sugar and nucleotide sugar metabolism
msa00521  Streptomycin biosynthesis
msa00523  Polyketide sugar unit biosynthesis
msa00525  Acarbose and validamycin biosynthesis
msa00540  Lipopolysaccharide biosynthesis
msa00541  O-Antigen nucleotide sugar biosynthesis
msa00542  O-Antigen repeat unit biosynthesis
msa00543  Exopolysaccharide biosynthesis
msa00550  Peptidoglycan biosynthesis
msa00552  Teichoic acid biosynthesis
msa00561  Glycerolipid metabolism
msa00562  Inositol phosphate metabolism
msa00564  Glycerophospholipid metabolism
msa00565  Ether lipid metabolism
msa00571  Lipoarabinomannan (LAM) biosynthesis
msa00572  Arabinogalactan biosynthesis - Mycobacterium
msa00592  alpha-Linolenic acid metabolism
msa00600  Sphingolipid metabolism
msa00620  Pyruvate metabolism
msa00621  Dioxin degradation
msa00622  Xylene degradation
msa00623  Toluene degradation
msa00625  Chloroalkane and chloroalkene degradation
msa00626  Naphthalene degradation
msa00627  Aminobenzoate degradation
msa00630  Glyoxylate and dicarboxylate metabolism
msa00633  Nitrotoluene degradation
msa00640  Propanoate metabolism
msa00643  Styrene degradation
msa00650  Butanoate metabolism
msa00660  C5-Branched dibasic acid metabolism
msa00670  One carbon pool by folate
msa00680  Methane metabolism
msa00710  Carbon fixation by Calvin cycle
msa00720  Other carbon fixation pathways
msa00730  Thiamine metabolism
msa00740  Riboflavin metabolism
msa00750  Vitamin B6 metabolism
msa00760  Nicotinate and nicotinamide metabolism
msa00770  Pantothenate and CoA biosynthesis
msa00780  Biotin metabolism
msa00785  Lipoic acid metabolism
msa00790  Folate biosynthesis
msa00791  Atrazine degradation
msa00860  Porphyrin metabolism
msa00900  Terpenoid backbone biosynthesis
msa00903  Limonene degradation
msa00906  Carotenoid biosynthesis
msa00907  Pinene, camphor and geraniol degradation
msa00910  Nitrogen metabolism
msa00920  Sulfur metabolism
msa00930  Caprolactam degradation
msa00983  Drug metabolism - other enzymes
msa00984  Steroid degradation
msa01040  Biosynthesis of unsaturated fatty acids
msa01055  Biosynthesis of vancomycin group antibiotics
msa01057  Biosynthesis of type II polyketide products
msa01059  Biosynthesis of enediyne antibiotics
KO pathway
ko01100   
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