PATHWAY: msin01100 Help Entry msin01100         Global    Pathway                                 Name Metabolic pathways - Magnolia sinica Class BRITE hierarchy Pathway map msin01100   Metabolic pathways Module msin_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:msin01100] msin_M00002   Glycolysis, core module involving three-carbon compounds [PATH:msin01100] msin_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:msin01100] msin_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:msin01100] msin_M00005   PRPP biosynthesis, ribose-5P => PRPP [PATH:msin01100] msin_M00006   Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P [PATH:msin01100] msin_M00007   Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P [PATH:msin01100] msin_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:msin01100] msin_M00012   Glyoxylate cycle [PATH:msin01100] msin_M00015   Proline biosynthesis, glutamate => proline [PATH:msin01100] msin_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:msin01100] msin_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:msin01100] msin_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:msin01100] msin_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:msin01100] msin_M00021   Cysteine biosynthesis, serine => cysteine [PATH:msin01100] msin_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:msin01100] msin_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:msin01100] msin_M00026   Histidine biosynthesis, PRPP => histidine [PATH:msin01100] msin_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:msin01100] msin_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:msin01100] msin_M00034   Methionine salvage pathway [PATH:msin01100] msin_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:msin01100] msin_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:msin01100] msin_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:msin01100] msin_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:msin01100] msin_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:msin01100] msin_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:msin01100] msin_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:msin01100] msin_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:msin01100] msin_M00072   N-glycosylation by oligosaccharyltransferase [PATH:msin01100] msin_M00073   N-glycan precursor trimming [PATH:msin01100] msin_M00081   Pectin degradation [PATH:msin01100] msin_M00082   Fatty acid biosynthesis, initiation [PATH:msin01100] msin_M00083   Fatty acid biosynthesis, elongation [PATH:msin01100] msin_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:msin01100] msin_M00087   beta-Oxidation [PATH:msin01100] msin_M00089   Triacylglycerol biosynthesis [PATH:msin01100] msin_M00092   Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:msin01100] msin_M00094   Ceramide biosynthesis [PATH:msin01100] msin_M00095   C5 isoprenoid biosynthesis, mevalonate pathway [PATH:msin01100] msin_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:msin01100] msin_M00098   Acylglycerol degradation [PATH:msin01100] msin_M00099   Sphingosine biosynthesis [PATH:msin01100] msin_M00100   Sphingosine degradation [PATH:msin01100] msin_M00112   Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:msin01100] msin_M00113   Jasmonic acid biosynthesis [PATH:msin01100] msin_M00114   Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:msin01100] msin_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:msin01100] msin_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:msin01100] msin_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:msin01100] msin_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:msin01100] msin_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:msin01100] msin_M00132   Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:msin01100] msin_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:msin01100] msin_M00137   Flavanone biosynthesis, phenylalanine => naringenin [PATH:msin01100] msin_M00138   Flavonoid biosynthesis, naringenin => pelargonidin [PATH:msin01100] msin_M00140   C1-unit interconversion, prokaryotes [PATH:msin01100] msin_M00145   NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:msin01100] msin_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:msin01100] msin_M00161   Photosystem II [PATH:msin01100] msin_M00163   Photosystem I [PATH:msin01100] msin_M00168   CAM (Crassulacean acid metabolism), dark [PATH:msin01100] msin_M00169   CAM (Crassulacean acid metabolism), light [PATH:msin01100] msin_M00170   C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:msin01100] msin_M00171   C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:msin01100] msin_M00172   C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:msin01100] msin_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:msin01100] msin_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:msin01100] msin_M00366   C10-C20 isoprenoid biosynthesis, plants [PATH:msin01100] msin_M00368   Ethylene biosynthesis, methionine => ethylene [PATH:msin01100] msin_M00371   Castasterone biosynthesis, plants, campesterol => castasterone [PATH:msin01100] msin_M00372   Abscisic acid biosynthesis, plants, 9'-cis-neoxanthin/9-cis-violaxanthin => abscisic acid [PATH:msin01100] msin_M00415   Fatty acid elongation in endoplasmic reticulum [PATH:msin01100] msin_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:msin01100] msin_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:msin01100] msin_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:msin01100] msin_M00549   UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:msin01100] msin_M00555   Betaine biosynthesis, choline => betaine [PATH:msin01100] msin_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:msin01100] msin_M00621   Glycine cleavage system [PATH:msin01100] msin_M00844   Arginine biosynthesis, ornithine => arginine [PATH:msin01100] msin_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:msin01100] msin_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:msin01100] msin_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:msin01100] msin_M00882   Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:msin01100] msin_M00892   UDP-GlcNAc biosynthesis, eukaryotes, Fru-6P => UDP-GlcNAc [PATH:msin01100] msin_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:msin01100] msin_M00910   Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:msin01100] msin_M00916   Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:msin01100] msin_M00927   Gibberellin A12 biosynthesis, plants, GAPP => GA12 [PATH:msin01100] msin_M00928   Gibberellin A4/A1 biosynthesis, plants, GA12/GA53 => GA4/GA1 [PATH:msin01100] msin_M00932   Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:msin01100] msin_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:msin01100] msin_M00940   Flavanone biosynthesis, p-coumaroyl-CoA => liquiritigenin [PATH:msin01100] msin_M00970   Proline degradation, proline => glutamate [PATH:msin01100] msin_M00972   Proline metabolism [PATH:msin01100] msin_M00987   Assimilatory sulfate reduction, plants, sulfate => H2S [PATH:msin01100] msin_M00994   UDP-GlcA biosynthesis, myo-inositol => GlcA => UDP-GlcA [PATH:msin01100] msin_M00997   UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala [PATH:msin01100] msin_M00998   UDP-L-Ara biosynthesis, L-Ala => UDP-L-Ala [PATH:msin01100] msin_M00999   UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA [PATH:msin01100] msin_M01000   GDP-Man biosynthesis, Fru-6P => GDP-Man [PATH:msin01100] msin_M01001   GDP-L-Fuc biosynthesis, L-Fuc => GDP-L-Fuc [PATH:msin01100] msin_M01003   UDP-GlcNAc biosynthesis, GlcNAc => UDP-GlcNAc [PATH:msin01100] msin_M01015   GDP-Man biosynthesis, Man => GDP-Man [PATH:msin01100] msin_M01016   GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc [PATH:msin01100] msin_M01021   UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha [PATH:msin01100] msin_M01040   Lutein biosynthesis, plants, lycopene => lutein [PATH:msin01100] msin_M01045   Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin [PATH:msin01100] msin_M01046   Xanthophyll cycle [PATH:msin01100] msin_M01048   Sulfoquinovosyldiacylglycerol (SQDG) biosynthesis, glucose-1P => SQDG [PATH:msin01100] Organism Magnolia sinica [GN:msin] Related pathway msin00010   Glycolysis / Gluconeogenesis msin00020   Citrate cycle (TCA cycle) msin00030   Pentose phosphate pathway msin00040   Pentose and glucuronate interconversions msin00051   Fructose and mannose metabolism msin00052   Galactose metabolism msin00053   Ascorbate and aldarate metabolism msin00061   Fatty acid biosynthesis msin00062   Fatty acid elongation msin00071   Fatty acid degradation msin00073   Cutin, suberine and wax biosynthesis msin00100   Steroid biosynthesis msin00130   Ubiquinone and other terpenoid-quinone biosynthesis msin00190   Oxidative phosphorylation msin00195   Photosynthesis msin00196   Photosynthesis - antenna proteins msin00220   Arginine biosynthesis msin00230   Purine metabolism msin00232   Caffeine metabolism msin00240   Pyrimidine metabolism msin00250   Alanine, aspartate and glutamate metabolism msin00260   Glycine, serine and threonine metabolism msin00261   Monobactam biosynthesis msin00270   Cysteine and methionine metabolism msin00280   Valine, leucine and isoleucine degradation msin00290   Valine, leucine and isoleucine biosynthesis msin00300   Lysine biosynthesis msin00310   Lysine degradation msin00330   Arginine and proline metabolism msin00340   Histidine metabolism msin00350   Tyrosine metabolism msin00360   Phenylalanine metabolism msin00380   Tryptophan metabolism msin00400   Phenylalanine, tyrosine and tryptophan biosynthesis msin00410   beta-Alanine metabolism msin00430   Taurine and hypotaurine metabolism msin00440   Phosphonate and phosphinate metabolism msin00450   Selenocompound metabolism msin00460   Cyanoamino acid metabolism msin00470   D-Amino acid metabolism msin00480   Glutathione metabolism msin00500   Starch and sucrose metabolism msin00510   N-Glycan biosynthesis msin00511   Other glycan degradation msin00513   Various types of N-glycan biosynthesis msin00514   Other types of O-glycan biosynthesis msin00520   Amino sugar and nucleotide sugar metabolism msin00531   Glycosaminoglycan degradation msin00540   Lipopolysaccharide biosynthesis msin00541   Biosynthesis of various nucleotide sugars msin00543   Exopolysaccharide biosynthesis msin00561   Glycerolipid metabolism msin00562   Inositol phosphate metabolism msin00563   Glycosylphosphatidylinositol (GPI)-anchor biosynthesis msin00564   Glycerophospholipid metabolism msin00565   Ether lipid metabolism msin00566   Sulfoquinovose metabolism msin00590   Arachidonic acid metabolism msin00591   Linoleic acid metabolism msin00592   alpha-Linolenic acid metabolism msin00600   Sphingolipid metabolism msin00601   Glycosphingolipid biosynthesis - lacto and neolacto series msin00603   Glycosphingolipid biosynthesis - globo and isoglobo series msin00620   Pyruvate metabolism msin00630   Glyoxylate and dicarboxylate metabolism msin00640   Propanoate metabolism msin00650   Butanoate metabolism msin00660   C5-Branched dibasic acid metabolism msin00670   One carbon pool by folate msin00710   Carbon fixation by Calvin cycle msin00730   Thiamine metabolism msin00740   Riboflavin metabolism msin00750   Vitamin B6 metabolism msin00760   Nicotinate and nicotinamide metabolism msin00770   Pantothenate and CoA biosynthesis msin00780   Biotin metabolism msin00785   Lipoic acid metabolism msin00790   Folate biosynthesis msin00860   Porphyrin metabolism msin00900   Terpenoid backbone biosynthesis msin00901   Indole alkaloid biosynthesis msin00902   Monoterpenoid biosynthesis msin00904   Diterpenoid biosynthesis msin00905   Brassinosteroid biosynthesis msin00906   Carotenoid biosynthesis msin00908   Zeatin biosynthesis msin00909   Sesquiterpenoid and triterpenoid biosynthesis msin00910   Nitrogen metabolism msin00920   Sulfur metabolism msin00940   Phenylpropanoid biosynthesis msin00941   Flavonoid biosynthesis msin00942   Anthocyanin biosynthesis msin00944   Flavone and flavonol biosynthesis msin00950   Isoquinoline alkaloid biosynthesis msin00960   Tropane, piperidine and pyridine alkaloid biosynthesis msin00965   Betalain biosynthesis msin00966   Glucosinolate biosynthesis msin00999   Biosynthesis of various plant secondary metabolites msin01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100

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