KEGG   PATHWAY: msm01100
Entry
msm01100                    Pathway                                
Name
Metabolic pathways - Mycolicibacterium smegmatis MC2 155
Class
Pathway map
msm01100  Metabolic pathways
msm01100

Module
msm_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:msm01100]
msm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:msm01100]
msm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:msm01100]
msm_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:msm01100]
msm_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:msm01100]
msm_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:msm01100]
msm_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:msm01100]
msm_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:msm01100]
msm_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:msm01100]
msm_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:msm01100]
msm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:msm01100]
msm_M00015  Proline biosynthesis, glutamate => proline [PATH:msm01100]
msm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:msm01100]
msm_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:msm01100]
msm_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:msm01100]
msm_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:msm01100]
msm_M00021  Cysteine biosynthesis, serine => cysteine [PATH:msm01100]
msm_M00026  Histidine biosynthesis, PRPP => histidine [PATH:msm01100]
msm_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:msm01100]
msm_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:msm01100]
msm_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:msm01100]
msm_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:msm01100]
msm_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:msm01100]
msm_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:msm01100]
msm_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:msm01100]
msm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:msm01100]
msm_M00082  Fatty acid biosynthesis, initiation [PATH:msm01100]
msm_M00083  Fatty acid biosynthesis, elongation [PATH:msm01100]
msm_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:msm01100]
msm_M00087  beta-Oxidation [PATH:msm01100]
msm_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:msm01100]
msm_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:msm01100]
msm_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:msm01100]
msm_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:msm01100]
msm_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:msm01100]
msm_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:msm01100]
msm_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:msm01100]
msm_M00149  Succinate dehydrogenase, prokaryotes [PATH:msm01100]
msm_M00151  Cytochrome bc1 complex respiratory unit [PATH:msm01100]
msm_M00155  Cytochrome c oxidase, prokaryotes [PATH:msm01100]
msm_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:msm01100]
msm_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:msm01100]
msm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:msm01100]
msm_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:msm01100]
msm_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:msm01100]
msm_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:msm01100]
msm_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:msm01100]
msm_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:msm01100]
msm_M00546  Purine degradation, xanthine => urea [PATH:msm01100]
msm_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:msm01100]
msm_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:msm01100]
msm_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:msm01100]
msm_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:msm01100]
msm_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:msm01100]
msm_M00621  Glycine cleavage system [PATH:msm01100]
msm_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:msm01100]
msm_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:msm01100]
msm_M00793  dTDP-L-rhamnose biosynthesis [PATH:msm01100]
msm_M00844  Arginine biosynthesis, ornithine => arginine [PATH:msm01100]
msm_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:msm01100]
msm_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:msm01100]
msm_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:msm01100]
msm_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:msm01100]
msm_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:msm01100]
msm_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:msm01100]
msm_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:msm01100]
msm_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:msm01100]
msm_M00970  Proline degradation, proline => glutamate [PATH:msm01100]
msm_M00972  Proline metabolism [PATH:msm01100]
Organism
Mycolicibacterium smegmatis MC2 155 [GN:msm]
Related
pathway
msm00010  Glycolysis / Gluconeogenesis
msm00020  Citrate cycle (TCA cycle)
msm00030  Pentose phosphate pathway
msm00040  Pentose and glucuronate interconversions
msm00051  Fructose and mannose metabolism
msm00052  Galactose metabolism
msm00053  Ascorbate and aldarate metabolism
msm00061  Fatty acid biosynthesis
msm00071  Fatty acid degradation
msm00100  Steroid biosynthesis
msm00121  Secondary bile acid biosynthesis
msm00130  Ubiquinone and other terpenoid-quinone biosynthesis
msm00190  Oxidative phosphorylation
msm00220  Arginine biosynthesis
msm00230  Purine metabolism
msm00232  Caffeine metabolism
msm00240  Pyrimidine metabolism
msm00250  Alanine, aspartate and glutamate metabolism
msm00260  Glycine, serine and threonine metabolism
msm00261  Monobactam biosynthesis
msm00270  Cysteine and methionine metabolism
msm00280  Valine, leucine and isoleucine degradation
msm00290  Valine, leucine and isoleucine biosynthesis
msm00300  Lysine biosynthesis
msm00310  Lysine degradation
msm00311  Penicillin and cephalosporin biosynthesis
msm00330  Arginine and proline metabolism
msm00332  Carbapenem biosynthesis
msm00340  Histidine metabolism
msm00350  Tyrosine metabolism
msm00360  Phenylalanine metabolism
msm00361  Chlorocyclohexane and chlorobenzene degradation
msm00362  Benzoate degradation
msm00364  Fluorobenzoate degradation
msm00380  Tryptophan metabolism
msm00400  Phenylalanine, tyrosine and tryptophan biosynthesis
msm00401  Novobiocin biosynthesis
msm00405  Phenazine biosynthesis
msm00410  beta-Alanine metabolism
msm00430  Taurine and hypotaurine metabolism
msm00450  Selenocompound metabolism
msm00460  Cyanoamino acid metabolism
msm00470  D-Amino acid metabolism
msm00480  Glutathione metabolism
msm00500  Starch and sucrose metabolism
msm00514  Other types of O-glycan biosynthesis
msm00515  Mannose type O-glycan biosynthesis
msm00520  Amino sugar and nucleotide sugar metabolism
msm00521  Streptomycin biosynthesis
msm00523  Polyketide sugar unit biosynthesis
msm00525  Acarbose and validamycin biosynthesis
msm00540  Lipopolysaccharide biosynthesis
msm00541  O-Antigen nucleotide sugar biosynthesis
msm00542  O-Antigen repeat unit biosynthesis
msm00543  Exopolysaccharide biosynthesis
msm00550  Peptidoglycan biosynthesis
msm00552  Teichoic acid biosynthesis
msm00561  Glycerolipid metabolism
msm00562  Inositol phosphate metabolism
msm00564  Glycerophospholipid metabolism
msm00592  alpha-Linolenic acid metabolism
msm00600  Sphingolipid metabolism
msm00620  Pyruvate metabolism
msm00621  Dioxin degradation
msm00622  Xylene degradation
msm00623  Toluene degradation
msm00625  Chloroalkane and chloroalkene degradation
msm00626  Naphthalene degradation
msm00627  Aminobenzoate degradation
msm00630  Glyoxylate and dicarboxylate metabolism
msm00633  Nitrotoluene degradation
msm00640  Propanoate metabolism
msm00643  Styrene degradation
msm00650  Butanoate metabolism
msm00660  C5-Branched dibasic acid metabolism
msm00670  One carbon pool by folate
msm00680  Methane metabolism
msm00730  Thiamine metabolism
msm00740  Riboflavin metabolism
msm00750  Vitamin B6 metabolism
msm00760  Nicotinate and nicotinamide metabolism
msm00770  Pantothenate and CoA biosynthesis
msm00780  Biotin metabolism
msm00785  Lipoic acid metabolism
msm00790  Folate biosynthesis
msm00791  Atrazine degradation
msm00860  Porphyrin metabolism
msm00900  Terpenoid backbone biosynthesis
msm00903  Limonene degradation
msm00906  Carotenoid biosynthesis
msm00907  Pinene, camphor and geraniol degradation
msm00910  Nitrogen metabolism
msm00920  Sulfur metabolism
msm00930  Caprolactam degradation
msm00946  Degradation of flavonoids
msm00984  Steroid degradation
msm00999  Biosynthesis of various plant secondary metabolites
msm01040  Biosynthesis of unsaturated fatty acids
msm01053  Biosynthesis of siderophore group nonribosomal peptides
msm01059  Biosynthesis of enediyne antibiotics
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system