KEGG   PATHWAY: msyl01100
Entry
msyl01100                   Pathway                                
Name
Metabolic pathways - Malus sylvestris (European crab apple)
Class
Pathway map
msyl01100  Metabolic pathways
msyl01100

Module
msyl_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:msyl01100]
msyl_M00002  Glycolysis, core module involving three-carbon compounds [PATH:msyl01100]
msyl_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:msyl01100]
msyl_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:msyl01100]
msyl_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:msyl01100]
msyl_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:msyl01100]
msyl_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:msyl01100]
msyl_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:msyl01100]
msyl_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:msyl01100]
msyl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:msyl01100]
msyl_M00012  Glyoxylate cycle [PATH:msyl01100]
msyl_M00015  Proline biosynthesis, glutamate => proline [PATH:msyl01100]
msyl_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:msyl01100]
msyl_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:msyl01100]
msyl_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:msyl01100]
msyl_M00021  Cysteine biosynthesis, serine => cysteine [PATH:msyl01100]
msyl_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:msyl01100]
msyl_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:msyl01100]
msyl_M00026  Histidine biosynthesis, PRPP => histidine [PATH:msyl01100]
msyl_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:msyl01100]
msyl_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:msyl01100]
msyl_M00034  Methionine salvage pathway [PATH:msyl01100]
msyl_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:msyl01100]
msyl_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:msyl01100]
msyl_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:msyl01100]
msyl_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:msyl01100]
msyl_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:msyl01100]
msyl_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:msyl01100]
msyl_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:msyl01100]
msyl_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:msyl01100]
msyl_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:msyl01100]
msyl_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:msyl01100]
msyl_M00055  N-glycan precursor biosynthesis [PATH:msyl01100]
msyl_M00073  N-glycan precursor trimming [PATH:msyl01100]
msyl_M00081  Pectin degradation [PATH:msyl01100]
msyl_M00082  Fatty acid biosynthesis, initiation [PATH:msyl01100]
msyl_M00083  Fatty acid biosynthesis, elongation [PATH:msyl01100]
msyl_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:msyl01100]
msyl_M00087  beta-Oxidation [PATH:msyl01100]
msyl_M00089  Triacylglycerol biosynthesis [PATH:msyl01100]
msyl_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:msyl01100]
msyl_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:msyl01100]
msyl_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:msyl01100]
msyl_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:msyl01100]
msyl_M00098  Acylglycerol degradation [PATH:msyl01100]
msyl_M00100  Sphingosine degradation [PATH:msyl01100]
msyl_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:msyl01100]
msyl_M00113  Jasmonic acid biosynthesis [PATH:msyl01100]
msyl_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:msyl01100]
msyl_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:msyl01100]
msyl_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:msyl01100]
msyl_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:msyl01100]
msyl_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:msyl01100]
msyl_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:msyl01100]
msyl_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:msyl01100]
msyl_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:msyl01100]
msyl_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:msyl01100]
msyl_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:msyl01100]
msyl_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:msyl01100]
msyl_M00142  NADH:ubiquinone oxidoreductase, mitochondria [PATH:msyl01100]
msyl_M00143  NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:msyl01100]
msyl_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:msyl01100]
msyl_M00148  Succinate dehydrogenase (ubiquinone) [PATH:msyl01100]
msyl_M00151  Cytochrome bc1 complex respiratory unit [PATH:msyl01100]
msyl_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:msyl01100]
msyl_M00161  Photosystem II [PATH:msyl01100]
msyl_M00163  Photosystem I [PATH:msyl01100]
msyl_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:msyl01100]
msyl_M00168  CAM (Crassulacean acid metabolism), dark [PATH:msyl01100]
msyl_M00169  CAM (Crassulacean acid metabolism), light [PATH:msyl01100]
msyl_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:msyl01100]
msyl_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:msyl01100]
msyl_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:msyl01100]
msyl_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:msyl01100]
msyl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:msyl01100]
msyl_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:msyl01100]
msyl_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:msyl01100]
msyl_M00371  Castasterone biosynthesis, campesterol => castasterone [PATH:msyl01100]
msyl_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:msyl01100]
msyl_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:msyl01100]
msyl_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:msyl01100]
msyl_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:msyl01100]
msyl_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:msyl01100]
msyl_M00532  Photorespiration [PATH:msyl01100]
msyl_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:msyl01100]
msyl_M00555  Betaine biosynthesis, choline => betaine [PATH:msyl01100]
msyl_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:msyl01100]
msyl_M00621  Glycine cleavage system [PATH:msyl01100]
msyl_M00844  Arginine biosynthesis, ornithine => arginine [PATH:msyl01100]
msyl_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:msyl01100]
msyl_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:msyl01100]
msyl_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:msyl01100]
msyl_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:msyl01100]
msyl_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:msyl01100]
msyl_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:msyl01100]
msyl_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:msyl01100]
msyl_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:msyl01100]
msyl_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:msyl01100]
msyl_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:msyl01100]
msyl_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:msyl01100]
msyl_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:msyl01100]
msyl_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:msyl01100]
msyl_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:msyl01100]
msyl_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:msyl01100]
msyl_M00940  Flavanone biosynthesis, p-coumaroyl-CoA => liquiritigenin [PATH:msyl01100]
msyl_M00970  Proline degradation, proline => glutamate [PATH:msyl01100]
msyl_M00972  Proline metabolism [PATH:msyl01100]
Organism
Malus sylvestris (European crab apple) [GN:msyl]
Related
pathway
msyl00010  Glycolysis / Gluconeogenesis
msyl00020  Citrate cycle (TCA cycle)
msyl00030  Pentose phosphate pathway
msyl00040  Pentose and glucuronate interconversions
msyl00051  Fructose and mannose metabolism
msyl00052  Galactose metabolism
msyl00053  Ascorbate and aldarate metabolism
msyl00061  Fatty acid biosynthesis
msyl00062  Fatty acid elongation
msyl00071  Fatty acid degradation
msyl00073  Cutin, suberine and wax biosynthesis
msyl00100  Steroid biosynthesis
msyl00130  Ubiquinone and other terpenoid-quinone biosynthesis
msyl00190  Oxidative phosphorylation
msyl00195  Photosynthesis
msyl00196  Photosynthesis - antenna proteins
msyl00220  Arginine biosynthesis
msyl00230  Purine metabolism
msyl00232  Caffeine metabolism
msyl00240  Pyrimidine metabolism
msyl00250  Alanine, aspartate and glutamate metabolism
msyl00260  Glycine, serine and threonine metabolism
msyl00261  Monobactam biosynthesis
msyl00270  Cysteine and methionine metabolism
msyl00280  Valine, leucine and isoleucine degradation
msyl00290  Valine, leucine and isoleucine biosynthesis
msyl00300  Lysine biosynthesis
msyl00310  Lysine degradation
msyl00330  Arginine and proline metabolism
msyl00340  Histidine metabolism
msyl00350  Tyrosine metabolism
msyl00360  Phenylalanine metabolism
msyl00380  Tryptophan metabolism
msyl00400  Phenylalanine, tyrosine and tryptophan biosynthesis
msyl00410  beta-Alanine metabolism
msyl00430  Taurine and hypotaurine metabolism
msyl00440  Phosphonate and phosphinate metabolism
msyl00450  Selenocompound metabolism
msyl00460  Cyanoamino acid metabolism
msyl00470  D-Amino acid metabolism
msyl00480  Glutathione metabolism
msyl00500  Starch and sucrose metabolism
msyl00510  N-Glycan biosynthesis
msyl00511  Other glycan degradation
msyl00513  Various types of N-glycan biosynthesis
msyl00514  Other types of O-glycan biosynthesis
msyl00520  Amino sugar and nucleotide sugar metabolism
msyl00531  Glycosaminoglycan degradation
msyl00543  Exopolysaccharide biosynthesis
msyl00561  Glycerolipid metabolism
msyl00562  Inositol phosphate metabolism
msyl00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
msyl00564  Glycerophospholipid metabolism
msyl00565  Ether lipid metabolism
msyl00590  Arachidonic acid metabolism
msyl00591  Linoleic acid metabolism
msyl00592  alpha-Linolenic acid metabolism
msyl00600  Sphingolipid metabolism
msyl00601  Glycosphingolipid biosynthesis - lacto and neolacto series
msyl00603  Glycosphingolipid biosynthesis - globo and isoglobo series
msyl00604  Glycosphingolipid biosynthesis - ganglio series
msyl00620  Pyruvate metabolism
msyl00630  Glyoxylate and dicarboxylate metabolism
msyl00640  Propanoate metabolism
msyl00650  Butanoate metabolism
msyl00660  C5-Branched dibasic acid metabolism
msyl00670  One carbon pool by folate
msyl00710  Carbon fixation in photosynthetic organisms
msyl00730  Thiamine metabolism
msyl00740  Riboflavin metabolism
msyl00750  Vitamin B6 metabolism
msyl00760  Nicotinate and nicotinamide metabolism
msyl00770  Pantothenate and CoA biosynthesis
msyl00780  Biotin metabolism
msyl00785  Lipoic acid metabolism
msyl00790  Folate biosynthesis
msyl00860  Porphyrin metabolism
msyl00900  Terpenoid backbone biosynthesis
msyl00902  Monoterpenoid biosynthesis
msyl00904  Diterpenoid biosynthesis
msyl00905  Brassinosteroid biosynthesis
msyl00906  Carotenoid biosynthesis
msyl00908  Zeatin biosynthesis
msyl00909  Sesquiterpenoid and triterpenoid biosynthesis
msyl00910  Nitrogen metabolism
msyl00920  Sulfur metabolism
msyl00940  Phenylpropanoid biosynthesis
msyl00941  Flavonoid biosynthesis
msyl00942  Anthocyanin biosynthesis
msyl00943  Isoflavonoid biosynthesis
msyl00944  Flavone and flavonol biosynthesis
msyl00950  Isoquinoline alkaloid biosynthesis
msyl00960  Tropane, piperidine and pyridine alkaloid biosynthesis
msyl00965  Betalain biosynthesis
msyl00966  Glucosinolate biosynthesis
msyl00999  Biosynthesis of various plant secondary metabolites
msyl01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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