KEGG   PATHWAY: mthb03430
Entry
mthb03430                   Pathway                                
Name
Mismatch repair - Macaca thibetana thibetana (Pere David's macaque)
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
mthb03430  Mismatch repair
mthb03430

Other DBs
GO: 0006298
Organism
Macaca thibetana thibetana (Pere David's macaque) [GN:mthb]
Gene
126949657  single-stranded DNA-binding protein, mitochondrial isoform X1 [KO:K03111]
126950452  mismatch repair endonuclease PMS2 isoform X1 [KO:K10858]
126950942  mismatch repair endonuclease PMS2-like [KO:K10858]
126948474  DNA mismatch repair protein Mlh1 isoform X1 [KO:K08734]
126934239  DNA mismatch repair protein Msh6 [KO:K08737]
126934240  DNA mismatch repair protein Msh2 isoform X1 [KO:K08735]
126957572  DNA mismatch repair protein Msh3 isoform X1 [KO:K08736]
126959490  DNA mismatch repair protein Mlh3 isoform X1 [KO:K08739]
126954649  replication factor C subunit 1 isoform X1 [KO:K10754]
126950376  replication factor C subunit 2 [KO:K10755]
126946422  replication factor C subunit 4 [KO:K10755]
126930658  replication factor C subunit 5 isoform X1 [KO:K10756]
126940309  replication factor C subunit 3 isoform X1 [KO:K10756]
126929128  proliferating cell nuclear antigen [KO:K04802]
126942932  exonuclease 1 [KO:K10746] [EC:3.1.-.-]
126938865  replication protein A 70 kDa DNA-binding subunit [KO:K07466]
126946522  LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit-like [KO:K07466]
126957857  replication protein A 32 kDa subunit isoform X1 [KO:K10739]
126949966  replication protein A 14 kDa subunit [KO:K10740]
126942367  replication protein A 14 kDa subunit-like [KO:K10740]
126945263  replication protein A 30 kDa subunit [KO:K10741]
126943092  transcription factor Spi-B isoform X1 [KO:K02327] [EC:2.7.7.7]
126950161  DNA polymerase delta subunit 2 [KO:K02328]
126935073  DNA polymerase delta subunit 3 [KO:K03504]
126935427  DNA polymerase delta subunit 4 isoform X1 [KO:K03505]
126943547  DNA ligase 1 isoform X1 [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
Related
pathway
mthb05210  Colorectal cancer
KO pathway
ko03430   
LinkDB

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