PATHWAY: mvar01100 Help Entry mvar01100                   Pathway                                 Name Metabolic pathways - Massilia varians Class BRITE hierarchy Pathway map mvar01100   Metabolic pathways Module mvar_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mvar01100] mvar_M00002   Glycolysis, core module involving three-carbon compounds [PATH:mvar01100] mvar_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mvar01100] mvar_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:mvar01100] mvar_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:mvar01100] mvar_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:mvar01100] mvar_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:mvar01100] mvar_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:mvar01100] mvar_M00012   Glyoxylate cycle [PATH:mvar01100] mvar_M00015   Proline biosynthesis, glutamate => proline [PATH:mvar01100] mvar_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:mvar01100] mvar_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:mvar01100] mvar_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:mvar01100] mvar_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:mvar01100] mvar_M00021   Cysteine biosynthesis, serine => cysteine [PATH:mvar01100] mvar_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:mvar01100] mvar_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:mvar01100] mvar_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:mvar01100] mvar_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:mvar01100] mvar_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:mvar01100] mvar_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:mvar01100] mvar_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:mvar01100] mvar_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:mvar01100] mvar_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:mvar01100] mvar_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:mvar01100] mvar_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:mvar01100] mvar_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mvar01100] mvar_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mvar01100] mvar_M00063   CMP-KDO biosynthesis [PATH:mvar01100] mvar_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:mvar01100] mvar_M00082   Fatty acid biosynthesis, initiation [PATH:mvar01100] mvar_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:mvar01100] mvar_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:mvar01100] mvar_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:mvar01100] mvar_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:mvar01100] mvar_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:mvar01100] mvar_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:mvar01100] mvar_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:mvar01100] mvar_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:mvar01100] mvar_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:mvar01100] mvar_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:mvar01100] mvar_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:mvar01100] mvar_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:mvar01100] mvar_M00149   Succinate dehydrogenase, prokaryotes [PATH:mvar01100] mvar_M00151   Cytochrome bc1 complex respiratory unit [PATH:mvar01100] mvar_M00155   Cytochrome c oxidase, prokaryotes [PATH:mvar01100] mvar_M00156   Cytochrome c oxidase, cbb3-type [PATH:mvar01100] mvar_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:mvar01100] mvar_M00168   CAM (Crassulacean acid metabolism), dark [PATH:mvar01100] mvar_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mvar01100] mvar_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:mvar01100] mvar_M00417   Cytochrome o ubiquinol oxidase [PATH:mvar01100] mvar_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:mvar01100] mvar_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:mvar01100] mvar_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:mvar01100] mvar_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:mvar01100] mvar_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:mvar01100] mvar_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:mvar01100] mvar_M00621   Glycine cleavage system [PATH:mvar01100] mvar_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:mvar01100] mvar_M00793   dTDP-L-rhamnose biosynthesis [PATH:mvar01100] mvar_M00844   Arginine biosynthesis, ornithine => arginine [PATH:mvar01100] mvar_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:mvar01100] mvar_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:mvar01100] mvar_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:mvar01100] mvar_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:mvar01100] mvar_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:mvar01100] mvar_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:mvar01100] mvar_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:mvar01100] mvar_M00970   Proline degradation, proline => glutamate [PATH:mvar01100] Organism Massilia varians [GN:mvar] Related pathway mvar00010   Glycolysis / Gluconeogenesis mvar00020   Citrate cycle (TCA cycle) mvar00030   Pentose phosphate pathway mvar00040   Pentose and glucuronate interconversions mvar00051   Fructose and mannose metabolism mvar00052   Galactose metabolism mvar00053   Ascorbate and aldarate metabolism mvar00061   Fatty acid biosynthesis mvar00071   Fatty acid degradation mvar00130   Ubiquinone and other terpenoid-quinone biosynthesis mvar00190   Oxidative phosphorylation mvar00220   Arginine biosynthesis mvar00230   Purine metabolism mvar00240   Pyrimidine metabolism mvar00250   Alanine, aspartate and glutamate metabolism mvar00260   Glycine, serine and threonine metabolism mvar00261   Monobactam biosynthesis mvar00270   Cysteine and methionine metabolism mvar00280   Valine, leucine and isoleucine degradation mvar00290   Valine, leucine and isoleucine biosynthesis mvar00300   Lysine biosynthesis mvar00310   Lysine degradation mvar00330   Arginine and proline metabolism mvar00332   Carbapenem biosynthesis mvar00340   Histidine metabolism mvar00350   Tyrosine metabolism mvar00360   Phenylalanine metabolism mvar00361   Chlorocyclohexane and chlorobenzene degradation mvar00362   Benzoate degradation mvar00364   Fluorobenzoate degradation mvar00365   Furfural degradation mvar00380   Tryptophan metabolism mvar00400   Phenylalanine, tyrosine and tryptophan biosynthesis mvar00401   Novobiocin biosynthesis mvar00410   beta-Alanine metabolism mvar00430   Taurine and hypotaurine metabolism mvar00450   Selenocompound metabolism mvar00460   Cyanoamino acid metabolism mvar00470   D-Amino acid metabolism mvar00480   Glutathione metabolism mvar00500   Starch and sucrose metabolism mvar00520   Amino sugar and nucleotide sugar metabolism mvar00521   Streptomycin biosynthesis mvar00523   Polyketide sugar unit biosynthesis mvar00525   Acarbose and validamycin biosynthesis mvar00540   Lipopolysaccharide biosynthesis mvar00541   O-Antigen nucleotide sugar biosynthesis mvar00543   Exopolysaccharide biosynthesis mvar00550   Peptidoglycan biosynthesis mvar00552   Teichoic acid biosynthesis mvar00561   Glycerolipid metabolism mvar00562   Inositol phosphate metabolism mvar00564   Glycerophospholipid metabolism mvar00592   alpha-Linolenic acid metabolism mvar00620   Pyruvate metabolism mvar00622   Xylene degradation mvar00623   Toluene degradation mvar00624   Polycyclic aromatic hydrocarbon degradation mvar00625   Chloroalkane and chloroalkene degradation mvar00626   Naphthalene degradation mvar00627   Aminobenzoate degradation mvar00630   Glyoxylate and dicarboxylate metabolism mvar00633   Nitrotoluene degradation mvar00640   Propanoate metabolism mvar00643   Styrene degradation mvar00650   Butanoate metabolism mvar00660   C5-Branched dibasic acid metabolism mvar00670   One carbon pool by folate mvar00680   Methane metabolism mvar00730   Thiamine metabolism mvar00740   Riboflavin metabolism mvar00750   Vitamin B6 metabolism mvar00760   Nicotinate and nicotinamide metabolism mvar00770   Pantothenate and CoA biosynthesis mvar00780   Biotin metabolism mvar00785   Lipoic acid metabolism mvar00790   Folate biosynthesis mvar00860   Porphyrin metabolism mvar00900   Terpenoid backbone biosynthesis mvar00906   Carotenoid biosynthesis mvar00907   Pinene, camphor and geraniol degradation mvar00910   Nitrogen metabolism mvar00920   Sulfur metabolism mvar00946   Degradation of flavonoids mvar00999   Biosynthesis of various plant secondary metabolites mvar01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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