KEGG   PATHWAY: nio00010
Entry
nio00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Candidatus Nitrospira inopinata
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
nio00010  Glycolysis / Gluconeogenesis
nio00010

Module
nio_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:nio00010]
nio_M00002  Glycolysis, core module involving three-carbon compounds [PATH:nio00010]
nio_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:nio00010]
Other DBs
GO: 0006096 0006094
Organism
Candidatus Nitrospira inopinata [GN:nio]
Gene
NITINOP_0914  glk; Glucokinase [KO:K00845] [EC:2.7.1.2]
NITINOP_0912  putative Glucose-6-phosphate isomerase [KO:K13810] [EC:2.2.1.2 5.3.1.9]
NITINOP_0538  pfkA; 6-Phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
NITINOP_3078  fbp; Fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
NITINOP_3077  fbaB; Fructose-bisphosphate aldolase class I [KO:K11645] [EC:4.1.2.13]
NITINOP_3159  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
NITINOP_3157  gapA; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
NITINOP_3158  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
NITINOP_1254  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
NITINOP_0768  apgM; 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
NITINOP_2374  eno; Enolase [KO:K01689] [EC:4.2.1.11]
NITINOP_2630  pykA; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
NITINOP_2180  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
NITINOP_2493  lpd; Dihydrolipoyl dehydrogenase, E3 component of Pyruvate and 2-oxoglutarate dehydrogenase complexes [KO:K00382] [EC:1.8.1.4]
NITINOP_1630  porA; Pyruvate:ferredoxin oxidoreductase, alpha subunit [KO:K00169] [EC:1.2.7.1]
NITINOP_0238  forA; 2-oxoglutarate:ferredoxin oxidoredutase alpha subunit [KO:K00169] [EC:1.2.7.1]
NITINOP_1629  porB; Pyruvate:ferredoxin oxidoreductase, beta subunit [KO:K00170] [EC:1.2.7.1]
NITINOP_0242  forB; 2-oxoglutarate:ferredoxin oxidoredutase beta subunit [KO:K00170] [EC:1.2.7.1]
NITINOP_1628  porC; Pyruvate:ferredoxin oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
NITINOP_0241  forC; 2-oxoglutarate:ferredoxin oxidoredutase gamma subunit [KO:K00172] [EC:1.2.7.1]
NITINOP_1627  porE; Pyruvate:ferredoxin oxidoreductase, epsilon subunit [KO:K00171] [EC:1.2.7.1]
NITINOP_1653  adhA; putative alcohol dehydrogenase AdhA [KO:K13953] [EC:1.1.1.1]
NITINOP_0505  adhC; Alcohol dehydrogenase, NADP-dependent [KO:K13979] [EC:1.1.1.2]
NITINOP_2186  acsA; Acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
NITINOP_0615  Putative Acyl-CoA synthetase (NDP forming) (fragment) [KO:K24012] [EC:6.2.1.13]
NITINOP_2245  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
NITINOP_3080  manB_pgm; bifunctional Phosphoglucomutase/Phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
nio00020  Citrate cycle (TCA cycle)
nio00030  Pentose phosphate pathway
nio00500  Starch and sucrose metabolism
nio00620  Pyruvate metabolism
nio00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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