KEGG   PATHWAY: njp00010
Entry
njp00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Neptunomonas japonica
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
njp00010  Glycolysis / Gluconeogenesis
njp00010

Module
njp_M00002  Glycolysis, core module involving three-carbon compounds [PATH:njp00010]
njp_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:njp00010]
njp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:njp00010]
Other DBs
GO: 0006096 0006094
Organism
Neptunomonas japonica [GN:njp]
Gene
NEJAP_0924  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
NEJAP_3288  pfkA; 6-phosphofructokinase 1 [KO:K00850] [EC:2.7.1.11]
NEJAP_2887  fbp; fructose-1,6-bisphosphatase I [KO:K03841] [EC:3.1.3.11]
NEJAP_0295  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
NEJAP_3620  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
NEJAP_1977  glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
NEJAP_2157  glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
NEJAP_0294  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
NEJAP_3315  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
NEJAP_0591  eno; enolase [KO:K01689] [EC:4.2.1.11]
NEJAP_3500  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
NEJAP_2068  pyruvate, water dikinase, C-terminal [KO:K01007] [EC:2.7.9.2]
NEJAP_2069  pyruvate, water dikinase, N-terminal [KO:K01007] [EC:2.7.9.2]
NEJAP_0901  aceE; pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
NEJAP_0902  pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [KO:K00627] [EC:2.3.1.12]
NEJAP_2385  lpd; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
NEJAP_1910  frmA; S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
NEJAP_0088  exaA; alcohol dehydrogenase (cytochrome c) [KO:K00114] [EC:1.1.2.8]
NEJAP_1805  aldehyde dehydrogenase (NAD+) [KO:K00128] [EC:1.2.1.3]
NEJAP_2452  aldehyde dehydrogenase (NAD+) [KO:K00128] [EC:1.2.1.3]
NEJAP_0090  aldehyde dehydrogenase (NAD+) [KO:K00138] [EC:1.2.1.-]
NEJAP_0703  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
NEJAP_1684  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
NEJAP_1784  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
NEJAP_3309  pmm-pgm; phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
NEJAP_3291  glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
NEJAP_3472  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
njp00020  Citrate cycle (TCA cycle)
njp00030  Pentose phosphate pathway
njp00500  Starch and sucrose metabolism
njp00620  Pyruvate metabolism
njp00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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