KEGG   PATHWAY: nor00010
Entry
nor00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Novosphingobium sp. EMRT-2
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
nor00010  Glycolysis / Gluconeogenesis
nor00010

Module
nor_M00002  Glycolysis, core module involving three-carbon compounds [PATH:nor00010]
nor_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:nor00010]
nor_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:nor00010]
Other DBs
GO: 0006096 0006094
Organism
Novosphingobium sp. EMRT-2 [GN:nor]
Gene
FA702_02360  glucokinase [KO:K00845] [EC:2.7.1.2]
FA702_16820  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
FA702_12355  glpX; class II fructose-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
FA702_01935  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
FA702_02975  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
FA702_01925  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
FA702_01930  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
FA702_12205  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
FA702_04050  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
FA702_15565  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
FA702_08725  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
FA702_17400  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
FA702_02285  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
FA702_02280  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
FA702_02045  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
FA702_02060  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FA702_15185  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FA702_03680  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
FA702_03675  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
FA702_12055  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
FA702_09085  Zn-dependent alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
FA702_20705  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
FA702_21630  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
FA702_22585  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
FA702_14960  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
FA702_19090  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
FA702_15745  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
FA702_20700  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
FA702_21635  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
FA702_22590  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
FA702_06950  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
FA702_13955  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
FA702_20165  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
FA702_13635  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
FA702_16125  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
nor00020  Citrate cycle (TCA cycle)
nor00030  Pentose phosphate pathway
nor00500  Starch and sucrose metabolism
nor00620  Pyruvate metabolism
nor00640  Propanoate metabolism
nor00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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