PATHWAY: palf01100 Help Entry palf01100                   Pathway                                 Name Metabolic pathways - Pantoea alfalfae Class BRITE hierarchy Pathway map palf01100   Metabolic pathways Module palf_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:palf01100] palf_M00002   Glycolysis, core module involving three-carbon compounds [PATH:palf01100] palf_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:palf01100] palf_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:palf01100] palf_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:palf01100] palf_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:palf01100] palf_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:palf01100] palf_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:palf01100] palf_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:palf01100] palf_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:palf01100] palf_M00012   Glyoxylate cycle [PATH:palf01100] palf_M00015   Proline biosynthesis, glutamate => proline [PATH:palf01100] palf_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:palf01100] palf_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:palf01100] palf_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:palf01100] palf_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:palf01100] palf_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:palf01100] palf_M00021   Cysteine biosynthesis, serine => cysteine [PATH:palf01100] palf_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:palf01100] palf_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:palf01100] palf_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:palf01100] palf_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:palf01100] palf_M00026   Histidine biosynthesis, PRPP => histidine [PATH:palf01100] palf_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:palf01100] palf_M00034   Methionine salvage pathway [PATH:palf01100] palf_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:palf01100] palf_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:palf01100] palf_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:palf01100] palf_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:palf01100] palf_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:palf01100] palf_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:palf01100] palf_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:palf01100] palf_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:palf01100] palf_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:palf01100] palf_M00063   CMP-KDO biosynthesis [PATH:palf01100] palf_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:palf01100] palf_M00082   Fatty acid biosynthesis, initiation [PATH:palf01100] palf_M00083   Fatty acid biosynthesis, elongation [PATH:palf01100] palf_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:palf01100] palf_M00087   beta-Oxidation [PATH:palf01100] palf_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:palf01100] palf_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:palf01100] palf_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:palf01100] palf_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:palf01100] palf_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:palf01100] palf_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:palf01100] palf_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:palf01100] palf_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:palf01100] palf_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:palf01100] palf_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:palf01100] palf_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:palf01100] palf_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:palf01100] palf_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:palf01100] palf_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:palf01100] palf_M00149   Succinate dehydrogenase, prokaryotes [PATH:palf01100] palf_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:palf01100] palf_M00168   CAM (Crassulacean acid metabolism), dark [PATH:palf01100] palf_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:palf01100] palf_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:palf01100] palf_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:palf01100] palf_M00417   Cytochrome o ubiquinol oxidase [PATH:palf01100] palf_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:palf01100] palf_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:palf01100] palf_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:palf01100] palf_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:palf01100] palf_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:palf01100] palf_M00555   Betaine biosynthesis, choline => betaine [PATH:palf01100] palf_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:palf01100] palf_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:palf01100] palf_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:palf01100] palf_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:palf01100] palf_M00621   Glycine cleavage system [PATH:palf01100] palf_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:palf01100] palf_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:palf01100] palf_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:palf01100] palf_M00793   dTDP-L-rhamnose biosynthesis [PATH:palf01100] palf_M00844   Arginine biosynthesis, ornithine => arginine [PATH:palf01100] palf_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:palf01100] palf_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:palf01100] palf_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:palf01100] palf_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:palf01100] palf_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:palf01100] palf_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:palf01100] palf_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:palf01100] palf_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:palf01100] palf_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:palf01100] palf_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:palf01100] palf_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:palf01100] palf_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:palf01100] palf_M00970   Proline degradation, proline => glutamate [PATH:palf01100] Organism Pantoea alfalfae [GN:palf] Related pathway palf00010   Glycolysis / Gluconeogenesis palf00020   Citrate cycle (TCA cycle) palf00030   Pentose phosphate pathway palf00040   Pentose and glucuronate interconversions palf00051   Fructose and mannose metabolism palf00052   Galactose metabolism palf00053   Ascorbate and aldarate metabolism palf00061   Fatty acid biosynthesis palf00071   Fatty acid degradation palf00130   Ubiquinone and other terpenoid-quinone biosynthesis palf00190   Oxidative phosphorylation palf00220   Arginine biosynthesis palf00230   Purine metabolism palf00240   Pyrimidine metabolism palf00250   Alanine, aspartate and glutamate metabolism palf00260   Glycine, serine and threonine metabolism palf00261   Monobactam biosynthesis palf00270   Cysteine and methionine metabolism palf00280   Valine, leucine and isoleucine degradation palf00290   Valine, leucine and isoleucine biosynthesis palf00300   Lysine biosynthesis palf00310   Lysine degradation palf00330   Arginine and proline metabolism palf00332   Carbapenem biosynthesis palf00340   Histidine metabolism palf00350   Tyrosine metabolism palf00360   Phenylalanine metabolism palf00361   Chlorocyclohexane and chlorobenzene degradation palf00362   Benzoate degradation palf00364   Fluorobenzoate degradation palf00380   Tryptophan metabolism palf00400   Phenylalanine, tyrosine and tryptophan biosynthesis palf00401   Novobiocin biosynthesis palf00410   beta-Alanine metabolism palf00430   Taurine and hypotaurine metabolism palf00440   Phosphonate and phosphinate metabolism palf00450   Selenocompound metabolism palf00460   Cyanoamino acid metabolism palf00470   D-Amino acid metabolism palf00480   Glutathione metabolism palf00500   Starch and sucrose metabolism palf00511   Other glycan degradation palf00520   Amino sugar and nucleotide sugar metabolism palf00521   Streptomycin biosynthesis palf00523   Polyketide sugar unit biosynthesis palf00525   Acarbose and validamycin biosynthesis palf00540   Lipopolysaccharide biosynthesis palf00541   O-Antigen nucleotide sugar biosynthesis palf00542   O-Antigen repeat unit biosynthesis palf00543   Exopolysaccharide biosynthesis palf00550   Peptidoglycan biosynthesis palf00552   Teichoic acid biosynthesis palf00561   Glycerolipid metabolism palf00562   Inositol phosphate metabolism palf00564   Glycerophospholipid metabolism palf00565   Ether lipid metabolism palf00592   alpha-Linolenic acid metabolism palf00600   Sphingolipid metabolism palf00620   Pyruvate metabolism palf00623   Toluene degradation palf00625   Chloroalkane and chloroalkene degradation palf00626   Naphthalene degradation palf00627   Aminobenzoate degradation palf00630   Glyoxylate and dicarboxylate metabolism palf00633   Nitrotoluene degradation palf00640   Propanoate metabolism palf00650   Butanoate metabolism palf00660   C5-Branched dibasic acid metabolism palf00670   One carbon pool by folate palf00680   Methane metabolism palf00730   Thiamine metabolism palf00740   Riboflavin metabolism palf00750   Vitamin B6 metabolism palf00760   Nicotinate and nicotinamide metabolism palf00770   Pantothenate and CoA biosynthesis palf00780   Biotin metabolism palf00785   Lipoic acid metabolism palf00790   Folate biosynthesis palf00791   Atrazine degradation palf00860   Porphyrin metabolism palf00900   Terpenoid backbone biosynthesis palf00906   Carotenoid biosynthesis palf00907   Pinene, camphor and geraniol degradation palf00910   Nitrogen metabolism palf00920   Sulfur metabolism palf00930   Caprolactam degradation palf00946   Degradation of flavonoids palf00999   Biosynthesis of various plant secondary metabolites palf01040   Biosynthesis of unsaturated fatty acids palf01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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