KEGG   PATHWAY: palk01100
Entry
palk01100                   Pathway                                
Name
Metabolic pathways - Pseudomonas alkylphenolica
Class
Pathway map
palk01100  Metabolic pathways
palk01100

Module
palk_M00002  Glycolysis, core module involving three-carbon compounds [PATH:palk01100]
palk_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:palk01100]
palk_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:palk01100]
palk_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:palk01100]
palk_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:palk01100]
palk_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:palk01100]
palk_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:palk01100]
palk_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:palk01100]
palk_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:palk01100]
palk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:palk01100]
palk_M00012  Glyoxylate cycle [PATH:palk01100]
palk_M00015  Proline biosynthesis, glutamate => proline [PATH:palk01100]
palk_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:palk01100]
palk_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:palk01100]
palk_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:palk01100]
palk_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:palk01100]
palk_M00021  Cysteine biosynthesis, serine => cysteine [PATH:palk01100]
palk_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:palk01100]
palk_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:palk01100]
palk_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:palk01100]
palk_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:palk01100]
palk_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:palk01100]
palk_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:palk01100]
palk_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:palk01100]
palk_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:palk01100]
palk_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:palk01100]
palk_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:palk01100]
palk_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:palk01100]
palk_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:palk01100]
palk_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:palk01100]
palk_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:palk01100]
palk_M00063  CMP-KDO biosynthesis [PATH:palk01100]
palk_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:palk01100]
palk_M00082  Fatty acid biosynthesis, initiation [PATH:palk01100]
palk_M00083  Fatty acid biosynthesis, elongation [PATH:palk01100]
palk_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:palk01100]
palk_M00087  beta-Oxidation [PATH:palk01100]
palk_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:palk01100]
palk_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:palk01100]
palk_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:palk01100]
palk_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:palk01100]
palk_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:palk01100]
palk_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:palk01100]
palk_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:palk01100]
palk_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:palk01100]
palk_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:palk01100]
palk_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:palk01100]
palk_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:palk01100]
palk_M00149  Succinate dehydrogenase, prokaryotes [PATH:palk01100]
palk_M00151  Cytochrome bc1 complex respiratory unit [PATH:palk01100]
palk_M00155  Cytochrome c oxidase, prokaryotes [PATH:palk01100]
palk_M00156  Cytochrome c oxidase, cbb3-type [PATH:palk01100]
palk_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:palk01100]
palk_M00168  CAM (Crassulacean acid metabolism), dark [PATH:palk01100]
palk_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:palk01100]
palk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:palk01100]
palk_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:palk01100]
palk_M00417  Cytochrome o ubiquinol oxidase [PATH:palk01100]
palk_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:palk01100]
palk_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:palk01100]
palk_M00548  Benzene degradation, benzene => catechol [PATH:palk01100]
palk_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:palk01100]
palk_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:palk01100]
palk_M00555  Betaine biosynthesis, choline => betaine [PATH:palk01100]
palk_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:palk01100]
palk_M00569  Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA [PATH:palk01100]
palk_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:palk01100]
palk_M00621  Glycine cleavage system [PATH:palk01100]
palk_M00793  dTDP-L-rhamnose biosynthesis [PATH:palk01100]
palk_M00844  Arginine biosynthesis, ornithine => arginine [PATH:palk01100]
palk_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:palk01100]
palk_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:palk01100]
palk_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:palk01100]
palk_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:palk01100]
palk_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:palk01100]
palk_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:palk01100]
palk_M00947  D-Arginine racemization, D-arginine => L-arginine [PATH:palk01100]
palk_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:palk01100]
palk_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:palk01100]
palk_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:palk01100]
palk_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:palk01100]
palk_M00970  Proline degradation, proline => glutamate [PATH:palk01100]
palk_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:palk01100]
Organism
Pseudomonas alkylphenolica [GN:palk]
Related
pathway
palk00010  Glycolysis / Gluconeogenesis
palk00020  Citrate cycle (TCA cycle)
palk00030  Pentose phosphate pathway
palk00040  Pentose and glucuronate interconversions
palk00051  Fructose and mannose metabolism
palk00052  Galactose metabolism
palk00053  Ascorbate and aldarate metabolism
palk00061  Fatty acid biosynthesis
palk00071  Fatty acid degradation
palk00074  Mycolic acid biosynthesis
palk00130  Ubiquinone and other terpenoid-quinone biosynthesis
palk00190  Oxidative phosphorylation
palk00220  Arginine biosynthesis
palk00230  Purine metabolism
palk00240  Pyrimidine metabolism
palk00250  Alanine, aspartate and glutamate metabolism
palk00260  Glycine, serine and threonine metabolism
palk00261  Monobactam biosynthesis
palk00270  Cysteine and methionine metabolism
palk00280  Valine, leucine and isoleucine degradation
palk00290  Valine, leucine and isoleucine biosynthesis
palk00300  Lysine biosynthesis
palk00310  Lysine degradation
palk00330  Arginine and proline metabolism
palk00332  Carbapenem biosynthesis
palk00340  Histidine metabolism
palk00350  Tyrosine metabolism
palk00360  Phenylalanine metabolism
palk00361  Chlorocyclohexane and chlorobenzene degradation
palk00362  Benzoate degradation
palk00363  Bisphenol degradation
palk00364  Fluorobenzoate degradation
palk00380  Tryptophan metabolism
palk00400  Phenylalanine, tyrosine and tryptophan biosynthesis
palk00401  Novobiocin biosynthesis
palk00410  beta-Alanine metabolism
palk00430  Taurine and hypotaurine metabolism
palk00440  Phosphonate and phosphinate metabolism
palk00450  Selenocompound metabolism
palk00460  Cyanoamino acid metabolism
palk00470  D-Amino acid metabolism
palk00480  Glutathione metabolism
palk00500  Starch and sucrose metabolism
palk00520  Amino sugar and nucleotide sugar metabolism
palk00521  Streptomycin biosynthesis
palk00523  Polyketide sugar unit biosynthesis
palk00525  Acarbose and validamycin biosynthesis
palk00540  Lipopolysaccharide biosynthesis
palk00541  O-Antigen nucleotide sugar biosynthesis
palk00543  Exopolysaccharide biosynthesis
palk00550  Peptidoglycan biosynthesis
palk00552  Teichoic acid biosynthesis
palk00561  Glycerolipid metabolism
palk00562  Inositol phosphate metabolism
palk00564  Glycerophospholipid metabolism
palk00592  alpha-Linolenic acid metabolism
palk00620  Pyruvate metabolism
palk00621  Dioxin degradation
palk00622  Xylene degradation
palk00623  Toluene degradation
palk00625  Chloroalkane and chloroalkene degradation
palk00626  Naphthalene degradation
palk00627  Aminobenzoate degradation
palk00630  Glyoxylate and dicarboxylate metabolism
palk00640  Propanoate metabolism
palk00643  Styrene degradation
palk00650  Butanoate metabolism
palk00660  C5-Branched dibasic acid metabolism
palk00670  One carbon pool by folate
palk00680  Methane metabolism
palk00710  Carbon fixation by Calvin cycle
palk00720  Other carbon fixation pathways
palk00730  Thiamine metabolism
palk00740  Riboflavin metabolism
palk00750  Vitamin B6 metabolism
palk00760  Nicotinate and nicotinamide metabolism
palk00770  Pantothenate and CoA biosynthesis
palk00780  Biotin metabolism
palk00785  Lipoic acid metabolism
palk00790  Folate biosynthesis
palk00860  Porphyrin metabolism
palk00900  Terpenoid backbone biosynthesis
palk00906  Carotenoid biosynthesis
palk00907  Pinene, camphor and geraniol degradation
palk00910  Nitrogen metabolism
palk00920  Sulfur metabolism
palk00930  Caprolactam degradation
palk00946  Degradation of flavonoids
palk00999  Biosynthesis of various plant secondary metabolites
palk01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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