KEGG   PATHWAY: pato01100
Entry
pato01100                   Pathway                                
Name
Metabolic pathways - Pectobacterium atrosepticum 21A
Class
Pathway map
pato01100  Metabolic pathways
pato01100

Module
pato_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pato01100]
pato_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pato01100]
pato_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pato01100]
pato_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pato01100]
pato_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pato01100]
pato_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pato01100]
pato_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pato01100]
pato_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pato01100]
pato_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pato01100]
pato_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pato01100]
pato_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pato01100]
pato_M00012  Glyoxylate cycle [PATH:pato01100]
pato_M00015  Proline biosynthesis, glutamate => proline [PATH:pato01100]
pato_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pato01100]
pato_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pato01100]
pato_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pato01100]
pato_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pato01100]
pato_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pato01100]
pato_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pato01100]
pato_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pato01100]
pato_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pato01100]
pato_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pato01100]
pato_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:pato01100]
pato_M00026  Histidine biosynthesis, PRPP => histidine [PATH:pato01100]
pato_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pato01100]
pato_M00034  Methionine salvage pathway [PATH:pato01100]
pato_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pato01100]
pato_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pato01100]
pato_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pato01100]
pato_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:pato01100]
pato_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pato01100]
pato_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pato01100]
pato_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:pato01100]
pato_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pato01100]
pato_M00063  CMP-KDO biosynthesis [PATH:pato01100]
pato_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pato01100]
pato_M00082  Fatty acid biosynthesis, initiation [PATH:pato01100]
pato_M00083  Fatty acid biosynthesis, elongation [PATH:pato01100]
pato_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pato01100]
pato_M00087  beta-Oxidation [PATH:pato01100]
pato_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pato01100]
pato_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pato01100]
pato_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pato01100]
pato_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:pato01100]
pato_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pato01100]
pato_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pato01100]
pato_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pato01100]
pato_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pato01100]
pato_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pato01100]
pato_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pato01100]
pato_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pato01100]
pato_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pato01100]
pato_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pato01100]
pato_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:pato01100]
pato_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pato01100]
pato_M00149  Succinate dehydrogenase, prokaryotes [PATH:pato01100]
pato_M00150  Fumarate reductase, prokaryotes [PATH:pato01100]
pato_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pato01100]
pato_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pato01100]
pato_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:pato01100]
pato_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pato01100]
pato_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pato01100]
pato_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:pato01100]
pato_M00417  Cytochrome o ubiquinol oxidase [PATH:pato01100]
pato_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pato01100]
pato_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pato01100]
pato_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pato01100]
pato_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pato01100]
pato_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pato01100]
pato_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pato01100]
pato_M00555  Betaine biosynthesis, choline => betaine [PATH:pato01100]
pato_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pato01100]
pato_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pato01100]
pato_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pato01100]
pato_M00621  Glycine cleavage system [PATH:pato01100]
pato_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:pato01100]
pato_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pato01100]
pato_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pato01100]
pato_M00793  dTDP-L-rhamnose biosynthesis [PATH:pato01100]
pato_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pato01100]
pato_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pato01100]
pato_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pato01100]
pato_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:pato01100]
pato_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pato01100]
pato_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pato01100]
pato_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:pato01100]
pato_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pato01100]
pato_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pato01100]
pato_M00970  Proline degradation, proline => glutamate [PATH:pato01100]
Organism
Pectobacterium atrosepticum 21A [GN:pato]
Related
pathway
pato00010  Glycolysis / Gluconeogenesis
pato00020  Citrate cycle (TCA cycle)
pato00030  Pentose phosphate pathway
pato00040  Pentose and glucuronate interconversions
pato00051  Fructose and mannose metabolism
pato00052  Galactose metabolism
pato00053  Ascorbate and aldarate metabolism
pato00061  Fatty acid biosynthesis
pato00071  Fatty acid degradation
pato00130  Ubiquinone and other terpenoid-quinone biosynthesis
pato00190  Oxidative phosphorylation
pato00220  Arginine biosynthesis
pato00230  Purine metabolism
pato00240  Pyrimidine metabolism
pato00250  Alanine, aspartate and glutamate metabolism
pato00260  Glycine, serine and threonine metabolism
pato00261  Monobactam biosynthesis
pato00270  Cysteine and methionine metabolism
pato00280  Valine, leucine and isoleucine degradation
pato00290  Valine, leucine and isoleucine biosynthesis
pato00300  Lysine biosynthesis
pato00310  Lysine degradation
pato00330  Arginine and proline metabolism
pato00332  Carbapenem biosynthesis
pato00340  Histidine metabolism
pato00350  Tyrosine metabolism
pato00360  Phenylalanine metabolism
pato00361  Chlorocyclohexane and chlorobenzene degradation
pato00362  Benzoate degradation
pato00364  Fluorobenzoate degradation
pato00380  Tryptophan metabolism
pato00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pato00401  Novobiocin biosynthesis
pato00405  Phenazine biosynthesis
pato00410  beta-Alanine metabolism
pato00430  Taurine and hypotaurine metabolism
pato00440  Phosphonate and phosphinate metabolism
pato00450  Selenocompound metabolism
pato00460  Cyanoamino acid metabolism
pato00470  D-Amino acid metabolism
pato00480  Glutathione metabolism
pato00500  Starch and sucrose metabolism
pato00511  Other glycan degradation
pato00520  Amino sugar and nucleotide sugar metabolism
pato00521  Streptomycin biosynthesis
pato00523  Polyketide sugar unit biosynthesis
pato00525  Acarbose and validamycin biosynthesis
pato00540  Lipopolysaccharide biosynthesis
pato00541  O-Antigen nucleotide sugar biosynthesis
pato00542  O-Antigen repeat unit biosynthesis
pato00543  Exopolysaccharide biosynthesis
pato00550  Peptidoglycan biosynthesis
pato00552  Teichoic acid biosynthesis
pato00561  Glycerolipid metabolism
pato00562  Inositol phosphate metabolism
pato00564  Glycerophospholipid metabolism
pato00565  Ether lipid metabolism
pato00591  Linoleic acid metabolism
pato00592  alpha-Linolenic acid metabolism
pato00600  Sphingolipid metabolism
pato00620  Pyruvate metabolism
pato00621  Dioxin degradation
pato00622  Xylene degradation
pato00623  Toluene degradation
pato00625  Chloroalkane and chloroalkene degradation
pato00626  Naphthalene degradation
pato00627  Aminobenzoate degradation
pato00630  Glyoxylate and dicarboxylate metabolism
pato00633  Nitrotoluene degradation
pato00640  Propanoate metabolism
pato00650  Butanoate metabolism
pato00660  C5-Branched dibasic acid metabolism
pato00670  One carbon pool by folate
pato00680  Methane metabolism
pato00730  Thiamine metabolism
pato00740  Riboflavin metabolism
pato00750  Vitamin B6 metabolism
pato00760  Nicotinate and nicotinamide metabolism
pato00770  Pantothenate and CoA biosynthesis
pato00780  Biotin metabolism
pato00785  Lipoic acid metabolism
pato00790  Folate biosynthesis
pato00791  Atrazine degradation
pato00860  Porphyrin metabolism
pato00900  Terpenoid backbone biosynthesis
pato00903  Limonene degradation
pato00907  Pinene, camphor and geraniol degradation
pato00910  Nitrogen metabolism
pato00920  Sulfur metabolism
pato00930  Caprolactam degradation
pato00946  Degradation of flavonoids
pato00997  Biosynthesis of various other secondary metabolites
pato00998  Biosynthesis of various antibiotics
pato00999  Biosynthesis of various plant secondary metabolites
pato01040  Biosynthesis of unsaturated fatty acids
pato01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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