KEGG   PATHWAY: patr01100
Entry
patr01100                   Pathway                                
Name
Metabolic pathways - Pectobacterium atrosepticum JG10-08
Class
Pathway map
patr01100  Metabolic pathways
patr01100

Module
patr_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:patr01100]
patr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:patr01100]
patr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:patr01100]
patr_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:patr01100]
patr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:patr01100]
patr_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:patr01100]
patr_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:patr01100]
patr_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:patr01100]
patr_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:patr01100]
patr_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:patr01100]
patr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:patr01100]
patr_M00012  Glyoxylate cycle [PATH:patr01100]
patr_M00015  Proline biosynthesis, glutamate => proline [PATH:patr01100]
patr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:patr01100]
patr_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:patr01100]
patr_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:patr01100]
patr_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:patr01100]
patr_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:patr01100]
patr_M00021  Cysteine biosynthesis, serine => cysteine [PATH:patr01100]
patr_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:patr01100]
patr_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:patr01100]
patr_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:patr01100]
patr_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:patr01100]
patr_M00026  Histidine biosynthesis, PRPP => histidine [PATH:patr01100]
patr_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:patr01100]
patr_M00034  Methionine salvage pathway [PATH:patr01100]
patr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:patr01100]
patr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:patr01100]
patr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:patr01100]
patr_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:patr01100]
patr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:patr01100]
patr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:patr01100]
patr_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:patr01100]
patr_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:patr01100]
patr_M00063  CMP-KDO biosynthesis [PATH:patr01100]
patr_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:patr01100]
patr_M00082  Fatty acid biosynthesis, initiation [PATH:patr01100]
patr_M00083  Fatty acid biosynthesis, elongation [PATH:patr01100]
patr_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:patr01100]
patr_M00087  beta-Oxidation [PATH:patr01100]
patr_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:patr01100]
patr_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:patr01100]
patr_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:patr01100]
patr_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:patr01100]
patr_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:patr01100]
patr_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:patr01100]
patr_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:patr01100]
patr_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:patr01100]
patr_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:patr01100]
patr_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:patr01100]
patr_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:patr01100]
patr_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:patr01100]
patr_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:patr01100]
patr_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:patr01100]
patr_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:patr01100]
patr_M00149  Succinate dehydrogenase, prokaryotes [PATH:patr01100]
patr_M00150  Fumarate reductase, prokaryotes [PATH:patr01100]
patr_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:patr01100]
patr_M00168  CAM (Crassulacean acid metabolism), dark [PATH:patr01100]
patr_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:patr01100]
patr_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:patr01100]
patr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:patr01100]
patr_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:patr01100]
patr_M00417  Cytochrome o ubiquinol oxidase [PATH:patr01100]
patr_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:patr01100]
patr_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:patr01100]
patr_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:patr01100]
patr_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:patr01100]
patr_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:patr01100]
patr_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:patr01100]
patr_M00555  Betaine biosynthesis, choline => betaine [PATH:patr01100]
patr_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:patr01100]
patr_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:patr01100]
patr_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:patr01100]
patr_M00621  Glycine cleavage system [PATH:patr01100]
patr_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:patr01100]
patr_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:patr01100]
patr_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:patr01100]
patr_M00793  dTDP-L-rhamnose biosynthesis [PATH:patr01100]
patr_M00844  Arginine biosynthesis, ornithine => arginine [PATH:patr01100]
patr_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:patr01100]
patr_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:patr01100]
patr_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:patr01100]
patr_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:patr01100]
patr_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:patr01100]
patr_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:patr01100]
patr_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:patr01100]
patr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:patr01100]
patr_M00970  Proline degradation, proline => glutamate [PATH:patr01100]
Organism
Pectobacterium atrosepticum JG10-08 [GN:patr]
Related
pathway
patr00010  Glycolysis / Gluconeogenesis
patr00020  Citrate cycle (TCA cycle)
patr00030  Pentose phosphate pathway
patr00040  Pentose and glucuronate interconversions
patr00051  Fructose and mannose metabolism
patr00052  Galactose metabolism
patr00053  Ascorbate and aldarate metabolism
patr00061  Fatty acid biosynthesis
patr00071  Fatty acid degradation
patr00074  Mycolic acid biosynthesis
patr00130  Ubiquinone and other terpenoid-quinone biosynthesis
patr00190  Oxidative phosphorylation
patr00220  Arginine biosynthesis
patr00230  Purine metabolism
patr00240  Pyrimidine metabolism
patr00250  Alanine, aspartate and glutamate metabolism
patr00260  Glycine, serine and threonine metabolism
patr00261  Monobactam biosynthesis
patr00270  Cysteine and methionine metabolism
patr00280  Valine, leucine and isoleucine degradation
patr00290  Valine, leucine and isoleucine biosynthesis
patr00300  Lysine biosynthesis
patr00310  Lysine degradation
patr00330  Arginine and proline metabolism
patr00332  Carbapenem biosynthesis
patr00340  Histidine metabolism
patr00350  Tyrosine metabolism
patr00360  Phenylalanine metabolism
patr00361  Chlorocyclohexane and chlorobenzene degradation
patr00362  Benzoate degradation
patr00364  Fluorobenzoate degradation
patr00380  Tryptophan metabolism
patr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
patr00401  Novobiocin biosynthesis
patr00405  Phenazine biosynthesis
patr00410  beta-Alanine metabolism
patr00430  Taurine and hypotaurine metabolism
patr00440  Phosphonate and phosphinate metabolism
patr00450  Selenocompound metabolism
patr00460  Cyanoamino acid metabolism
patr00470  D-Amino acid metabolism
patr00480  Glutathione metabolism
patr00500  Starch and sucrose metabolism
patr00511  Other glycan degradation
patr00520  Amino sugar and nucleotide sugar metabolism
patr00521  Streptomycin biosynthesis
patr00523  Polyketide sugar unit biosynthesis
patr00525  Acarbose and validamycin biosynthesis
patr00540  Lipopolysaccharide biosynthesis
patr00541  O-Antigen nucleotide sugar biosynthesis
patr00542  O-Antigen repeat unit biosynthesis
patr00543  Exopolysaccharide biosynthesis
patr00550  Peptidoglycan biosynthesis
patr00552  Teichoic acid biosynthesis
patr00561  Glycerolipid metabolism
patr00562  Inositol phosphate metabolism
patr00564  Glycerophospholipid metabolism
patr00565  Ether lipid metabolism
patr00591  Linoleic acid metabolism
patr00592  alpha-Linolenic acid metabolism
patr00600  Sphingolipid metabolism
patr00620  Pyruvate metabolism
patr00621  Dioxin degradation
patr00622  Xylene degradation
patr00623  Toluene degradation
patr00625  Chloroalkane and chloroalkene degradation
patr00626  Naphthalene degradation
patr00627  Aminobenzoate degradation
patr00630  Glyoxylate and dicarboxylate metabolism
patr00633  Nitrotoluene degradation
patr00640  Propanoate metabolism
patr00650  Butanoate metabolism
patr00660  C5-Branched dibasic acid metabolism
patr00670  One carbon pool by folate
patr00680  Methane metabolism
patr00710  Carbon fixation by Calvin cycle
patr00720  Other carbon fixation pathways
patr00730  Thiamine metabolism
patr00740  Riboflavin metabolism
patr00750  Vitamin B6 metabolism
patr00760  Nicotinate and nicotinamide metabolism
patr00770  Pantothenate and CoA biosynthesis
patr00780  Biotin metabolism
patr00785  Lipoic acid metabolism
patr00790  Folate biosynthesis
patr00791  Atrazine degradation
patr00860  Porphyrin metabolism
patr00900  Terpenoid backbone biosynthesis
patr00903  Limonene degradation
patr00907  Pinene, camphor and geraniol degradation
patr00910  Nitrogen metabolism
patr00920  Sulfur metabolism
patr00930  Caprolactam degradation
patr00946  Degradation of flavonoids
patr00997  Biosynthesis of various other secondary metabolites
patr00998  Biosynthesis of various antibiotics
patr00999  Biosynthesis of various plant secondary metabolites
patr01040  Biosynthesis of unsaturated fatty acids
patr01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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