KEGG   PATHWAY: pavi01100
Entry
pavi01100                   Pathway                                
Name
Metabolic pathways - Prunus avium (sweet cherry)
Class
Pathway map
pavi01100  Metabolic pathways
pavi01100

Module
pavi_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pavi01100]
pavi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pavi01100]
pavi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pavi01100]
pavi_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pavi01100]
pavi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pavi01100]
pavi_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pavi01100]
pavi_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pavi01100]
pavi_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pavi01100]
pavi_M00012  Glyoxylate cycle [PATH:pavi01100]
pavi_M00015  Proline biosynthesis, glutamate => proline [PATH:pavi01100]
pavi_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pavi01100]
pavi_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pavi01100]
pavi_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pavi01100]
pavi_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pavi01100]
pavi_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pavi01100]
pavi_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pavi01100]
pavi_M00026  Histidine biosynthesis, PRPP => histidine [PATH:pavi01100]
pavi_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:pavi01100]
pavi_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pavi01100]
pavi_M00034  Methionine salvage pathway [PATH:pavi01100]
pavi_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pavi01100]
pavi_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:pavi01100]
pavi_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pavi01100]
pavi_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pavi01100]
pavi_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pavi01100]
pavi_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pavi01100]
pavi_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pavi01100]
pavi_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pavi01100]
pavi_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pavi01100]
pavi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pavi01100]
pavi_M00055  N-glycan precursor biosynthesis [PATH:pavi01100]
pavi_M00073  N-glycan precursor trimming [PATH:pavi01100]
pavi_M00081  Pectin degradation [PATH:pavi01100]
pavi_M00082  Fatty acid biosynthesis, initiation [PATH:pavi01100]
pavi_M00083  Fatty acid biosynthesis, elongation [PATH:pavi01100]
pavi_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pavi01100]
pavi_M00087  beta-Oxidation [PATH:pavi01100]
pavi_M00089  Triacylglycerol biosynthesis [PATH:pavi01100]
pavi_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:pavi01100]
pavi_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:pavi01100]
pavi_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pavi01100]
pavi_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:pavi01100]
pavi_M00098  Acylglycerol degradation [PATH:pavi01100]
pavi_M00100  Sphingosine degradation [PATH:pavi01100]
pavi_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:pavi01100]
pavi_M00113  Jasmonic acid biosynthesis [PATH:pavi01100]
pavi_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:pavi01100]
pavi_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pavi01100]
pavi_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pavi01100]
pavi_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pavi01100]
pavi_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pavi01100]
pavi_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pavi01100]
pavi_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:pavi01100]
pavi_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:pavi01100]
pavi_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:pavi01100]
pavi_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:pavi01100]
pavi_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pavi01100]
pavi_M00169  CAM (Crassulacean acid metabolism), light [PATH:pavi01100]
pavi_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:pavi01100]
pavi_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:pavi01100]
pavi_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:pavi01100]
pavi_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pavi01100]
pavi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pavi01100]
pavi_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:pavi01100]
pavi_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:pavi01100]
pavi_M00371  Castasterone biosynthesis, campesterol => castasterone [PATH:pavi01100]
pavi_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:pavi01100]
pavi_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:pavi01100]
pavi_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pavi01100]
pavi_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:pavi01100]
pavi_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pavi01100]
pavi_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pavi01100]
pavi_M00555  Betaine biosynthesis, choline => betaine [PATH:pavi01100]
pavi_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pavi01100]
pavi_M00621  Glycine cleavage system [PATH:pavi01100]
pavi_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pavi01100]
pavi_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pavi01100]
pavi_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pavi01100]
pavi_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pavi01100]
pavi_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:pavi01100]
pavi_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:pavi01100]
pavi_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:pavi01100]
pavi_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:pavi01100]
pavi_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pavi01100]
pavi_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:pavi01100]
pavi_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:pavi01100]
pavi_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:pavi01100]
pavi_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:pavi01100]
pavi_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:pavi01100]
pavi_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pavi01100]
pavi_M00970  Proline degradation, proline => glutamate [PATH:pavi01100]
pavi_M00972  Proline metabolism [PATH:pavi01100]
Organism
Prunus avium (sweet cherry) [GN:pavi]
Related
pathway
pavi00010  Glycolysis / Gluconeogenesis
pavi00020  Citrate cycle (TCA cycle)
pavi00030  Pentose phosphate pathway
pavi00040  Pentose and glucuronate interconversions
pavi00051  Fructose and mannose metabolism
pavi00052  Galactose metabolism
pavi00053  Ascorbate and aldarate metabolism
pavi00061  Fatty acid biosynthesis
pavi00062  Fatty acid elongation
pavi00071  Fatty acid degradation
pavi00073  Cutin, suberine and wax biosynthesis
pavi00100  Steroid biosynthesis
pavi00130  Ubiquinone and other terpenoid-quinone biosynthesis
pavi00190  Oxidative phosphorylation
pavi00195  Photosynthesis
pavi00196  Photosynthesis - antenna proteins
pavi00220  Arginine biosynthesis
pavi00230  Purine metabolism
pavi00232  Caffeine metabolism
pavi00240  Pyrimidine metabolism
pavi00250  Alanine, aspartate and glutamate metabolism
pavi00260  Glycine, serine and threonine metabolism
pavi00261  Monobactam biosynthesis
pavi00270  Cysteine and methionine metabolism
pavi00280  Valine, leucine and isoleucine degradation
pavi00290  Valine, leucine and isoleucine biosynthesis
pavi00300  Lysine biosynthesis
pavi00310  Lysine degradation
pavi00330  Arginine and proline metabolism
pavi00340  Histidine metabolism
pavi00350  Tyrosine metabolism
pavi00360  Phenylalanine metabolism
pavi00380  Tryptophan metabolism
pavi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pavi00410  beta-Alanine metabolism
pavi00430  Taurine and hypotaurine metabolism
pavi00440  Phosphonate and phosphinate metabolism
pavi00450  Selenocompound metabolism
pavi00460  Cyanoamino acid metabolism
pavi00470  D-Amino acid metabolism
pavi00480  Glutathione metabolism
pavi00500  Starch and sucrose metabolism
pavi00510  N-Glycan biosynthesis
pavi00511  Other glycan degradation
pavi00513  Various types of N-glycan biosynthesis
pavi00514  Other types of O-glycan biosynthesis
pavi00520  Amino sugar and nucleotide sugar metabolism
pavi00531  Glycosaminoglycan degradation
pavi00543  Exopolysaccharide biosynthesis
pavi00561  Glycerolipid metabolism
pavi00562  Inositol phosphate metabolism
pavi00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pavi00564  Glycerophospholipid metabolism
pavi00565  Ether lipid metabolism
pavi00590  Arachidonic acid metabolism
pavi00591  Linoleic acid metabolism
pavi00592  alpha-Linolenic acid metabolism
pavi00600  Sphingolipid metabolism
pavi00601  Glycosphingolipid biosynthesis - lacto and neolacto series
pavi00603  Glycosphingolipid biosynthesis - globo and isoglobo series
pavi00604  Glycosphingolipid biosynthesis - ganglio series
pavi00620  Pyruvate metabolism
pavi00630  Glyoxylate and dicarboxylate metabolism
pavi00640  Propanoate metabolism
pavi00650  Butanoate metabolism
pavi00660  C5-Branched dibasic acid metabolism
pavi00670  One carbon pool by folate
pavi00710  Carbon fixation by Calvin cycle
pavi00730  Thiamine metabolism
pavi00740  Riboflavin metabolism
pavi00750  Vitamin B6 metabolism
pavi00760  Nicotinate and nicotinamide metabolism
pavi00770  Pantothenate and CoA biosynthesis
pavi00780  Biotin metabolism
pavi00785  Lipoic acid metabolism
pavi00790  Folate biosynthesis
pavi00860  Porphyrin metabolism
pavi00900  Terpenoid backbone biosynthesis
pavi00901  Indole alkaloid biosynthesis
pavi00902  Monoterpenoid biosynthesis
pavi00904  Diterpenoid biosynthesis
pavi00905  Brassinosteroid biosynthesis
pavi00906  Carotenoid biosynthesis
pavi00908  Zeatin biosynthesis
pavi00909  Sesquiterpenoid and triterpenoid biosynthesis
pavi00910  Nitrogen metabolism
pavi00920  Sulfur metabolism
pavi00940  Phenylpropanoid biosynthesis
pavi00941  Flavonoid biosynthesis
pavi00942  Anthocyanin biosynthesis
pavi00943  Isoflavonoid biosynthesis
pavi00944  Flavone and flavonol biosynthesis
pavi00950  Isoquinoline alkaloid biosynthesis
pavi00960  Tropane, piperidine and pyridine alkaloid biosynthesis
pavi00965  Betalain biosynthesis
pavi00966  Glucosinolate biosynthesis
pavi00999  Biosynthesis of various plant secondary metabolites
pavi01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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