PATHWAY: pcd01100 Help Entry pcd01100                    Pathway                                 Name Metabolic pathways - Mixta calida Class BRITE hierarchy Pathway map pcd01100   Metabolic pathways Module pcd_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pcd01100] pcd_M00002   Glycolysis, core module involving three-carbon compounds [PATH:pcd01100] pcd_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pcd01100] pcd_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pcd01100] pcd_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pcd01100] pcd_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pcd01100] pcd_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pcd01100] pcd_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:pcd01100] pcd_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pcd01100] pcd_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pcd01100] pcd_M00015   Proline biosynthesis, glutamate => proline [PATH:pcd01100] pcd_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pcd01100] pcd_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pcd01100] pcd_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pcd01100] pcd_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pcd01100] pcd_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:pcd01100] pcd_M00021   Cysteine biosynthesis, serine => cysteine [PATH:pcd01100] pcd_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pcd01100] pcd_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:pcd01100] pcd_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pcd01100] pcd_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:pcd01100] pcd_M00026   Histidine biosynthesis, PRPP => histidine [PATH:pcd01100] pcd_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:pcd01100] pcd_M00034   Methionine salvage pathway [PATH:pcd01100] pcd_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pcd01100] pcd_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pcd01100] pcd_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pcd01100] pcd_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pcd01100] pcd_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:pcd01100] pcd_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pcd01100] pcd_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pcd01100] pcd_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:pcd01100] pcd_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pcd01100] pcd_M00063   CMP-KDO biosynthesis [PATH:pcd01100] pcd_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pcd01100] pcd_M00082   Fatty acid biosynthesis, initiation [PATH:pcd01100] pcd_M00083   Fatty acid biosynthesis, elongation [PATH:pcd01100] pcd_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:pcd01100] pcd_M00087   beta-Oxidation [PATH:pcd01100] pcd_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pcd01100] pcd_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pcd01100] pcd_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pcd01100] pcd_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pcd01100] pcd_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:pcd01100] pcd_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pcd01100] pcd_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pcd01100] pcd_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pcd01100] pcd_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pcd01100] pcd_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pcd01100] pcd_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pcd01100] pcd_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:pcd01100] pcd_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:pcd01100] pcd_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:pcd01100] pcd_M00149   Succinate dehydrogenase, prokaryotes [PATH:pcd01100] pcd_M00150   Fumarate reductase, prokaryotes [PATH:pcd01100] pcd_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:pcd01100] pcd_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:pcd01100] pcd_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pcd01100] pcd_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:pcd01100] pcd_M00417   Cytochrome o ubiquinol oxidase [PATH:pcd01100] pcd_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pcd01100] pcd_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pcd01100] pcd_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:pcd01100] pcd_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pcd01100] pcd_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pcd01100] pcd_M00555   Betaine biosynthesis, choline => betaine [PATH:pcd01100] pcd_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:pcd01100] pcd_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pcd01100] pcd_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pcd01100] pcd_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pcd01100] pcd_M00621   Glycine cleavage system [PATH:pcd01100] pcd_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:pcd01100] pcd_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pcd01100] pcd_M00793   dTDP-L-rhamnose biosynthesis [PATH:pcd01100] pcd_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pcd01100] pcd_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pcd01100] pcd_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pcd01100] pcd_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:pcd01100] pcd_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:pcd01100] pcd_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pcd01100] pcd_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pcd01100] pcd_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:pcd01100] pcd_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pcd01100] pcd_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pcd01100] pcd_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:pcd01100] pcd_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:pcd01100] pcd_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:pcd01100] pcd_M00970   Proline degradation, proline => glutamate [PATH:pcd01100] Organism Mixta calida [GN:pcd] Related pathway pcd00010   Glycolysis / Gluconeogenesis pcd00020   Citrate cycle (TCA cycle) pcd00030   Pentose phosphate pathway pcd00040   Pentose and glucuronate interconversions pcd00051   Fructose and mannose metabolism pcd00052   Galactose metabolism pcd00053   Ascorbate and aldarate metabolism pcd00061   Fatty acid biosynthesis pcd00071   Fatty acid degradation pcd00130   Ubiquinone and other terpenoid-quinone biosynthesis pcd00190   Oxidative phosphorylation pcd00220   Arginine biosynthesis pcd00230   Purine metabolism pcd00240   Pyrimidine metabolism pcd00250   Alanine, aspartate and glutamate metabolism pcd00260   Glycine, serine and threonine metabolism pcd00261   Monobactam biosynthesis pcd00270   Cysteine and methionine metabolism pcd00280   Valine, leucine and isoleucine degradation pcd00290   Valine, leucine and isoleucine biosynthesis pcd00300   Lysine biosynthesis pcd00310   Lysine degradation pcd00330   Arginine and proline metabolism pcd00332   Carbapenem biosynthesis pcd00340   Histidine metabolism pcd00350   Tyrosine metabolism pcd00360   Phenylalanine metabolism pcd00361   Chlorocyclohexane and chlorobenzene degradation pcd00362   Benzoate degradation pcd00364   Fluorobenzoate degradation pcd00380   Tryptophan metabolism pcd00400   Phenylalanine, tyrosine and tryptophan biosynthesis pcd00401   Novobiocin biosynthesis pcd00410   beta-Alanine metabolism pcd00430   Taurine and hypotaurine metabolism pcd00450   Selenocompound metabolism pcd00460   Cyanoamino acid metabolism pcd00470   D-Amino acid metabolism pcd00480   Glutathione metabolism pcd00500   Starch and sucrose metabolism pcd00511   Other glycan degradation pcd00520   Amino sugar and nucleotide sugar metabolism pcd00521   Streptomycin biosynthesis pcd00523   Polyketide sugar unit biosynthesis pcd00525   Acarbose and validamycin biosynthesis pcd00540   Lipopolysaccharide biosynthesis pcd00541   O-Antigen nucleotide sugar biosynthesis pcd00542   O-Antigen repeat unit biosynthesis pcd00543   Exopolysaccharide biosynthesis pcd00550   Peptidoglycan biosynthesis pcd00552   Teichoic acid biosynthesis pcd00561   Glycerolipid metabolism pcd00562   Inositol phosphate metabolism pcd00564   Glycerophospholipid metabolism pcd00565   Ether lipid metabolism pcd00592   alpha-Linolenic acid metabolism pcd00600   Sphingolipid metabolism pcd00620   Pyruvate metabolism pcd00623   Toluene degradation pcd00625   Chloroalkane and chloroalkene degradation pcd00626   Naphthalene degradation pcd00627   Aminobenzoate degradation pcd00630   Glyoxylate and dicarboxylate metabolism pcd00633   Nitrotoluene degradation pcd00640   Propanoate metabolism pcd00650   Butanoate metabolism pcd00660   C5-Branched dibasic acid metabolism pcd00670   One carbon pool by folate pcd00680   Methane metabolism pcd00730   Thiamine metabolism pcd00740   Riboflavin metabolism pcd00750   Vitamin B6 metabolism pcd00760   Nicotinate and nicotinamide metabolism pcd00770   Pantothenate and CoA biosynthesis pcd00780   Biotin metabolism pcd00785   Lipoic acid metabolism pcd00790   Folate biosynthesis pcd00860   Porphyrin metabolism pcd00900   Terpenoid backbone biosynthesis pcd00906   Carotenoid biosynthesis pcd00907   Pinene, camphor and geraniol degradation pcd00910   Nitrogen metabolism pcd00920   Sulfur metabolism pcd00930   Caprolactam degradation pcd00946   Degradation of flavonoids pcd00999   Biosynthesis of various plant secondary metabolites pcd01040   Biosynthesis of unsaturated fatty acids pcd01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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