KEGG   PATHWAY: pdc00010
Entry
pdc00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Clostridioides difficile 630
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pdc00010  Glycolysis / Gluconeogenesis
pdc00010

Module
pdc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pdc00010]
pdc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pdc00010]
pdc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pdc00010]
Other DBs
GO: 0006096 0006094
Organism
Clostridioides difficile 630 [GN:pdc]
Gene
CDIF630_02705  glcK; glucokinase [KO:K25026] [EC:2.7.1.2]
CDIF630_03585  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
CDIF630_03700  pfkA; ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
CDIF630_03394  pfp; diphosphate-fructose-6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
CDIF630_01340  fbp; fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
CDIF630_00531  fba; fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
CDIF630_03420  gatY2; D-tagatose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
CDIF630_03464  tpi; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
CDIF630_03466  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
CDIF630_01964  gapB; glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [KO:K00150] [EC:1.2.1.59]
CDIF630_03465  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
CDIF630_03463  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
CDIF630_03462  eno; enolase [KO:K01689] [EC:4.2.1.11]
CDIF630_03699  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
CDIF630_02652  ppdK; pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
CDIF630_00100  acoC; acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [KO:K00627] [EC:2.3.1.12]
CDIF630_00101  acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) [KO:K00382] [EC:1.8.1.4]
CDIF630_00839  lpdA; glycine cleavage system, dihydrolipoyl dehydrogenase subunit [KO:K00382] [EC:1.8.1.4]
CDIF630_02936  pfo; pyruvate synthase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
CDIF630_00231  vorB1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
CDIF630_02431  vorB2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
CDIF630_02671  vorB3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
CDIF630_00232  vorA1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
CDIF630_02430  vorA2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
CDIF630_02670  vorA3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
CDIF630_02396  ldh; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
CDIF630_00462  adhE1; aldehyde-alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
CDIF630_03250  adhE2; aldehyde-alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
CDIF630_02439  aldH; aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
CDIF630_02428  putative acetate--CoA ligase (ADP-forming) [KO:K24012] [EC:6.2.1.13]
CDIF630_01746  pgcA1; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
CDIF630_03043  pgcA2; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
CDIF630_00693  gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [KO:K00131] [EC:1.2.1.9]
CDIF630_03150  celF; 6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
CDIF630_00936  bglC; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDIF630_00516  bglA1; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDIF630_03362  bglA2; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDIF630_03378  bglA3; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDIF630_03379  ascB1; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDIF630_03399  bglA4; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDIF630_03409  ascB2; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDIF630_03415  bglH; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDIF630_03421  bglA5; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDIF630_02920  ptsG-A; PTS system, glucose-specific IIA component [KO:K02777] [EC:2.7.1.-]
CDIF630_03387  PTS system, glucose-like IIA component [KO:K02777] [EC:2.7.1.-]
CDIF630_02761  PTS system, maltose-specific IIA component [KO:K02777] [EC:2.7.1.-]
CDIF630_03311  PTS system, arabinose-specific IIA component [KO:K02777] [EC:2.7.1.-]
CDIF630_03341  PTS system, maltose-specific IIA component [KO:K02777] [EC:2.7.1.-]
CDIF630_02759  PTS system, maltose-specific IIBC component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
CDIF630_03314  PTS system, arabinose-specific IIBC component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
CDIF630_01492  PTS system, glucose-like IIBC component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
CDIF630_02921  ptsG-BC; PTS system, glucose-specific IIBC component [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pdc00020  Citrate cycle (TCA cycle)
pdc00030  Pentose phosphate pathway
pdc00500  Starch and sucrose metabolism
pdc00620  Pyruvate metabolism
pdc00640  Propanoate metabolism
pdc00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system