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Entry Name ABC transporters - Clostridioides difficile 630Derm
Description The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class Environmental Information Processing; Membrane transportBRITE hierarchy
Pathway map Ortholog table Other DBs Organism Clostridioides difficile 630Derm [GN:
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Gene CD630DERM_29890 ssuA2; ABC-type transport system, sulfonate-familyextracellular solute-binding protein [KO:K15553 ]
CD630DERM_14840 ssuA; ABC-type transportsystem,alkanesulfonates-family extracellularsolute-binding protein [KO:K15553 ]
CD630DERM_08690 modA; ABC-type transport system, molybdenum-specificextracellular solute-binding protein [KO:K02020 ]
CD630DERM_23110 ABC-type transport system, molybdenum-likeextracellular solute-binding protein [KO:K02020 ]
CD630DERM_03000 rbsB; ABC-type transport system, ribose-specificextracellular solute-binding protein [KO:K10439 ]
CD630DERM_32680 pstS; ABC-type transport system, phosphateextracellular solute-binding protein [KO:K02040 ]
CD630DERM_21740 ABC-type transportsystem,cystine/aminoacid-family extracellularsolute-binding protein [KO:K16961 ]
CD630DERM_21770 ABC-type transportsystem,cystine/aminoacid-family extracellularsolute-binding protein [KO:K16961 ]
CD630DERM_07500 ABC-type transport system, aminoacid-familyextracellular solute-binding protein [KO:K23059 ]
CD630DERM_14910 metQ; ABC-type transport system, methionine-specificsubstrate-binding lipoprotein [KO:K02073 ]
CD630DERM_03250 cbiN; ABC-type transport system, cobalt-specificextracellular solute-binding protein [KO:K02009 ]
CD630DERM_01000 cbiO1; ABC-type transport system, cobalt-specificATP-binding protein [KO:K16786 ] [EC:7.-.-.-]
CD630DERM_01010 cbiO2; ABC-type transport system, cobalt-specificATP-binding protein [KO:K16787 ] [EC:7.-.-.-]
CD630DERM_10970 ABC-type transport system, multidrug-familyATP-binding protein Tn1549-like, CTn4-Orf28 [KO:K19309 ]
CD630DERM_03660 ABC-type transport system, multidrug-familyATP-binding protein Tn916-like, CTn1-Orf11 [KO:K19309 ]
CD630DERM_06670 cdd4; ABC-type transportsystem,lantibiotic/multidrug-family ATP-binding protein [KO:K20459 ]
CD630DERM_04780 spaF; ABC-type transportsystem,lantibiotic/multidrug-family ATP-binding protein [KO:K20490 ]
CD630DERM_13490 cprA; ABC-type transportsystem,lantibiotic/multidrug-family ATP-binding protein [KO:K20490 ]
CD630DERM_04320 ABC-type transport system, multidrug-familypermease Tn1549-like, CTn2-Orf27 [KO:K14698 ] [EC:7.-.-.-]
CD630DERM_04330 ABC-type transport system, multidrug-familypermease Tn1549-like, CTn2-Orf28 [KO:K14699 ] [EC:7.-.-.-]
Compound C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference Authors Tomii K, Kanehisa M.
Title A comparative analysis of ABC transporters in complete microbial genomes.
Journal Reference Authors Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal Reference Authors Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal Reference Authors Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal Reference Authors Quintero MJ, Montesinos ML, Herrero A, Flores E
Title Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal Reference Authors Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal Reference Authors Valladares A, Montesinos ML, Herrero A, Flores E.
Title An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal Reference Authors Richard-Fogal CL, Frawley ER, Kranz RG
Title Topology and function of CcmD in cytochrome c maturation.
Journal Reference Authors Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal Reference Authors Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal Reference Authors Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal Reference Authors Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal KO pathway LinkDB All DBs
