PATHWAY: pfib01100 Help Entry pfib01100                   Pathway                                 Name Metabolic pathways - Pandoraea fibrosis Class BRITE hierarchy Pathway map pfib01100   Metabolic pathways Module pfib_M00002   Glycolysis, core module involving three-carbon compounds [PATH:pfib01100] pfib_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pfib01100] pfib_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pfib01100] pfib_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pfib01100] pfib_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pfib01100] pfib_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pfib01100] pfib_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pfib01100] pfib_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:pfib01100] pfib_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pfib01100] pfib_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pfib01100] pfib_M00012   Glyoxylate cycle [PATH:pfib01100] pfib_M00015   Proline biosynthesis, glutamate => proline [PATH:pfib01100] pfib_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pfib01100] pfib_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pfib01100] pfib_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pfib01100] pfib_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:pfib01100] pfib_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pfib01100] pfib_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:pfib01100] pfib_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pfib01100] pfib_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:pfib01100] pfib_M00026   Histidine biosynthesis, PRPP => histidine [PATH:pfib01100] pfib_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:pfib01100] pfib_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:pfib01100] pfib_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pfib01100] pfib_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pfib01100] pfib_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pfib01100] pfib_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pfib01100] pfib_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pfib01100] pfib_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pfib01100] pfib_M00063   CMP-KDO biosynthesis [PATH:pfib01100] pfib_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pfib01100] pfib_M00082   Fatty acid biosynthesis, initiation [PATH:pfib01100] pfib_M00083   Fatty acid biosynthesis, elongation [PATH:pfib01100] pfib_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:pfib01100] pfib_M00087   beta-Oxidation [PATH:pfib01100] pfib_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pfib01100] pfib_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pfib01100] pfib_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pfib01100] pfib_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:pfib01100] pfib_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pfib01100] pfib_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pfib01100] pfib_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pfib01100] pfib_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pfib01100] pfib_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pfib01100] pfib_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:pfib01100] pfib_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:pfib01100] pfib_M00149   Succinate dehydrogenase, prokaryotes [PATH:pfib01100] pfib_M00151   Cytochrome bc1 complex respiratory unit [PATH:pfib01100] pfib_M00155   Cytochrome c oxidase, prokaryotes [PATH:pfib01100] pfib_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:pfib01100] pfib_M00168   CAM (Crassulacean acid metabolism), dark [PATH:pfib01100] pfib_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:pfib01100] pfib_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pfib01100] pfib_M00417   Cytochrome o ubiquinol oxidase [PATH:pfib01100] pfib_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pfib01100] pfib_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:pfib01100] pfib_M00546   Purine degradation, xanthine => urea [PATH:pfib01100] pfib_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pfib01100] pfib_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pfib01100] pfib_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:pfib01100] pfib_M00621   Glycine cleavage system [PATH:pfib01100] pfib_M00638   Salicylate degradation, salicylate => gentisate [PATH:pfib01100] pfib_M00793   dTDP-L-rhamnose biosynthesis [PATH:pfib01100] pfib_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pfib01100] pfib_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:pfib01100] pfib_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pfib01100] pfib_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pfib01100] pfib_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pfib01100] pfib_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pfib01100] pfib_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:pfib01100] pfib_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:pfib01100] pfib_M00970   Proline degradation, proline => glutamate [PATH:pfib01100] Organism Pandoraea fibrosis [GN:pfib] Related pathway pfib00010   Glycolysis / Gluconeogenesis pfib00020   Citrate cycle (TCA cycle) pfib00030   Pentose phosphate pathway pfib00040   Pentose and glucuronate interconversions pfib00051   Fructose and mannose metabolism pfib00052   Galactose metabolism pfib00053   Ascorbate and aldarate metabolism pfib00061   Fatty acid biosynthesis pfib00071   Fatty acid degradation pfib00130   Ubiquinone and other terpenoid-quinone biosynthesis pfib00190   Oxidative phosphorylation pfib00220   Arginine biosynthesis pfib00230   Purine metabolism pfib00240   Pyrimidine metabolism pfib00250   Alanine, aspartate and glutamate metabolism pfib00260   Glycine, serine and threonine metabolism pfib00261   Monobactam biosynthesis pfib00270   Cysteine and methionine metabolism pfib00280   Valine, leucine and isoleucine degradation pfib00290   Valine, leucine and isoleucine biosynthesis pfib00300   Lysine biosynthesis pfib00310   Lysine degradation pfib00311   Penicillin and cephalosporin biosynthesis pfib00330   Arginine and proline metabolism pfib00332   Carbapenem biosynthesis pfib00340   Histidine metabolism pfib00350   Tyrosine metabolism pfib00360   Phenylalanine metabolism pfib00361   Chlorocyclohexane and chlorobenzene degradation pfib00362   Benzoate degradation pfib00364   Fluorobenzoate degradation pfib00380   Tryptophan metabolism pfib00400   Phenylalanine, tyrosine and tryptophan biosynthesis pfib00401   Novobiocin biosynthesis pfib00405   Phenazine biosynthesis pfib00410   beta-Alanine metabolism pfib00430   Taurine and hypotaurine metabolism pfib00440   Phosphonate and phosphinate metabolism pfib00450   Selenocompound metabolism pfib00460   Cyanoamino acid metabolism pfib00470   D-Amino acid metabolism pfib00480   Glutathione metabolism pfib00500   Starch and sucrose metabolism pfib00520   Amino sugar and nucleotide sugar metabolism pfib00521   Streptomycin biosynthesis pfib00523   Polyketide sugar unit biosynthesis pfib00525   Acarbose and validamycin biosynthesis pfib00540   Lipopolysaccharide biosynthesis pfib00541   O-Antigen nucleotide sugar biosynthesis pfib00542   O-Antigen repeat unit biosynthesis pfib00543   Exopolysaccharide biosynthesis pfib00550   Peptidoglycan biosynthesis pfib00552   Teichoic acid biosynthesis pfib00561   Glycerolipid metabolism pfib00562   Inositol phosphate metabolism pfib00564   Glycerophospholipid metabolism pfib00592   alpha-Linolenic acid metabolism pfib00620   Pyruvate metabolism pfib00621   Dioxin degradation pfib00622   Xylene degradation pfib00623   Toluene degradation pfib00624   Polycyclic aromatic hydrocarbon degradation pfib00625   Chloroalkane and chloroalkene degradation pfib00626   Naphthalene degradation pfib00627   Aminobenzoate degradation pfib00630   Glyoxylate and dicarboxylate metabolism pfib00633   Nitrotoluene degradation pfib00640   Propanoate metabolism pfib00642   Ethylbenzene degradation pfib00643   Styrene degradation pfib00650   Butanoate metabolism pfib00660   C5-Branched dibasic acid metabolism pfib00670   One carbon pool by folate pfib00680   Methane metabolism pfib00730   Thiamine metabolism pfib00740   Riboflavin metabolism pfib00750   Vitamin B6 metabolism pfib00760   Nicotinate and nicotinamide metabolism pfib00770   Pantothenate and CoA biosynthesis pfib00780   Biotin metabolism pfib00785   Lipoic acid metabolism pfib00790   Folate biosynthesis pfib00860   Porphyrin metabolism pfib00900   Terpenoid backbone biosynthesis pfib00906   Carotenoid biosynthesis pfib00907   Pinene, camphor and geraniol degradation pfib00909   Sesquiterpenoid and triterpenoid biosynthesis pfib00910   Nitrogen metabolism pfib00920   Sulfur metabolism pfib00930   Caprolactam degradation pfib00946   Degradation of flavonoids pfib00984   Steroid degradation pfib00996   Biosynthesis of various alkaloids pfib00998   Biosynthesis of various antibiotics pfib00999   Biosynthesis of various plant secondary metabolites pfib01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system