KEGG   PATHWAY: pfr03440
Entry
pfr03440                    Pathway                                
Name
Homologous recombination - Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
pfr03440  Homologous recombination
pfr03440

Other DBs
GO: 0000724
Organism
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 [GN:pfr]
Gene
PFREUD_07960  ssb2; Single-stranded DNA-binding protein 2 (SSB 2) (Helix-destabilizing protein 2) [KO:K03111]
PFREUD_23460  ssb; Single-strand binding protein [KO:K03111]
PFREUD_00090  recF; DNA replication and repair protein recF [KO:K03629]
PFREUD_08950  recO; DNA repair protein recO (Recombination protein O) [KO:K03584]
PFREUD_03840  recR; Recombination protein recR [KO:K06187]
PFREUD_13130  recA; RecA (Recombinase A) [KO:K03553]
PFREUD_15360  polA; Putative DNA polymerase I [KO:K02335] [EC:2.7.7.7]
PFREUD_11710  ruvA; Holliday junction ATP-dependent DNA helicase [KO:K03550]
PFREUD_11700  ruvB; Holliday junction ATP-dependent DNA helicase [KO:K03551] [EC:5.6.2.4]
PFREUD_11720  ruvC; Crossover junction endodeoxyribonuclease (Holliday junction nuclease) (Holliday junction resolvase) [KO:K01159] [EC:3.1.21.10]
PFREUD_14510  recG; ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
PFREUD_09850  recB; Exodeoxyribonuclease V beta chain RecB [KO:K03582] [EC:3.1.11.5]
PFREUD_09860  recC; Exodeoxyribonuclease V gamma subunit RecC [KO:K03583] [EC:3.1.11.5]
PFREUD_09840  recD; Probable exodeoxyribonuclease V alpha chain RecD [KO:K03581] [EC:3.1.11.5]
PFREUD_11830  dnaE1; DNA polymerase III alpha subunit [KO:K02337] [EC:2.7.7.7]
PFREUD_00080  dnaN; DNA polymerase III, beta chain [KO:K02338] [EC:2.7.7.7]
PFREUD_03820  Hypothetical protein [KO:K02343] [EC:2.7.7.7]
PFREUD_08660  holA; DNA polymerase III, delta subunit [KO:K02340] [EC:2.7.7.7]
PFREUD_20530  dnaX; DNA polymerase III, delta prime subunit [KO:K02341] [EC:2.7.7.7]
PFREUD_01710  exonuclease [KO:K02342] [EC:2.7.7.7]
PFREUD_11400  priA; Primosomal protein N [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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