PATHWAY: pfz01100 Help Entry pfz01100                    Pathway                                 Name Metabolic pathways - Pseudomonas fragi Class BRITE hierarchy Pathway map pfz01100   Metabolic pathways Module pfz_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pfz01100] pfz_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pfz01100] pfz_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pfz01100] pfz_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:pfz01100] pfz_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pfz01100] pfz_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pfz01100] pfz_M00015   Proline biosynthesis, glutamate => proline [PATH:pfz01100] pfz_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pfz01100] pfz_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pfz01100] pfz_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:pfz01100] pfz_M00021   Cysteine biosynthesis, serine => cysteine [PATH:pfz01100] pfz_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pfz01100] pfz_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pfz01100] pfz_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:pfz01100] pfz_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:pfz01100] pfz_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pfz01100] pfz_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pfz01100] pfz_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:pfz01100] pfz_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pfz01100] pfz_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pfz01100] pfz_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pfz01100] pfz_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pfz01100] pfz_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pfz01100] pfz_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pfz01100] pfz_M00063   CMP-KDO biosynthesis [PATH:pfz01100] pfz_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pfz01100] pfz_M00082   Fatty acid biosynthesis, initiation [PATH:pfz01100] pfz_M00083   Fatty acid biosynthesis, elongation [PATH:pfz01100] pfz_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:pfz01100] pfz_M00087   beta-Oxidation [PATH:pfz01100] pfz_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pfz01100] pfz_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pfz01100] pfz_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pfz01100] pfz_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:pfz01100] pfz_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pfz01100] pfz_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pfz01100] pfz_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pfz01100] pfz_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pfz01100] pfz_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pfz01100] pfz_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pfz01100] pfz_M00149   Succinate dehydrogenase, prokaryotes [PATH:pfz01100] pfz_M00151   Cytochrome bc1 complex respiratory unit [PATH:pfz01100] pfz_M00155   Cytochrome c oxidase, prokaryotes [PATH:pfz01100] pfz_M00156   Cytochrome c oxidase, cbb3-type [PATH:pfz01100] pfz_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:pfz01100] pfz_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pfz01100] pfz_M00417   Cytochrome o ubiquinol oxidase [PATH:pfz01100] pfz_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pfz01100] pfz_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pfz01100] pfz_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:pfz01100] pfz_M00555   Betaine biosynthesis, choline => betaine [PATH:pfz01100] pfz_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:pfz01100] pfz_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pfz01100] pfz_M00621   Glycine cleavage system [PATH:pfz01100] pfz_M00622   Nicotinate degradation, nicotinate => fumarate [PATH:pfz01100] pfz_M00793   dTDP-L-rhamnose biosynthesis [PATH:pfz01100] pfz_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pfz01100] pfz_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pfz01100] pfz_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:pfz01100] pfz_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pfz01100] pfz_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pfz01100] pfz_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pfz01100] pfz_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pfz01100] pfz_M00957   Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pfz01100] pfz_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:pfz01100] pfz_M00970   Proline degradation, proline => glutamate [PATH:pfz01100] pfz_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:pfz01100] Organism Pseudomonas fragi [GN:pfz] Related pathway pfz00010   Glycolysis / Gluconeogenesis pfz00020   Citrate cycle (TCA cycle) pfz00030   Pentose phosphate pathway pfz00040   Pentose and glucuronate interconversions pfz00051   Fructose and mannose metabolism pfz00052   Galactose metabolism pfz00053   Ascorbate and aldarate metabolism pfz00061   Fatty acid biosynthesis pfz00071   Fatty acid degradation pfz00121   Secondary bile acid biosynthesis pfz00130   Ubiquinone and other terpenoid-quinone biosynthesis pfz00190   Oxidative phosphorylation pfz00220   Arginine biosynthesis pfz00230   Purine metabolism pfz00240   Pyrimidine metabolism pfz00250   Alanine, aspartate and glutamate metabolism pfz00260   Glycine, serine and threonine metabolism pfz00261   Monobactam biosynthesis pfz00270   Cysteine and methionine metabolism pfz00280   Valine, leucine and isoleucine degradation pfz00290   Valine, leucine and isoleucine biosynthesis pfz00300   Lysine biosynthesis pfz00310   Lysine degradation pfz00330   Arginine and proline metabolism pfz00332   Carbapenem biosynthesis pfz00340   Histidine metabolism pfz00350   Tyrosine metabolism pfz00360   Phenylalanine metabolism pfz00361   Chlorocyclohexane and chlorobenzene degradation pfz00362   Benzoate degradation pfz00364   Fluorobenzoate degradation pfz00380   Tryptophan metabolism pfz00400   Phenylalanine, tyrosine and tryptophan biosynthesis pfz00401   Novobiocin biosynthesis pfz00410   beta-Alanine metabolism pfz00430   Taurine and hypotaurine metabolism pfz00440   Phosphonate and phosphinate metabolism pfz00450   Selenocompound metabolism pfz00460   Cyanoamino acid metabolism pfz00470   D-Amino acid metabolism pfz00480   Glutathione metabolism pfz00500   Starch and sucrose metabolism pfz00520   Amino sugar and nucleotide sugar metabolism pfz00521   Streptomycin biosynthesis pfz00523   Polyketide sugar unit biosynthesis pfz00525   Acarbose and validamycin biosynthesis pfz00540   Lipopolysaccharide biosynthesis pfz00541   O-Antigen nucleotide sugar biosynthesis pfz00543   Exopolysaccharide biosynthesis pfz00550   Peptidoglycan biosynthesis pfz00552   Teichoic acid biosynthesis pfz00561   Glycerolipid metabolism pfz00562   Inositol phosphate metabolism pfz00564   Glycerophospholipid metabolism pfz00592   alpha-Linolenic acid metabolism pfz00620   Pyruvate metabolism pfz00621   Dioxin degradation pfz00622   Xylene degradation pfz00623   Toluene degradation pfz00625   Chloroalkane and chloroalkene degradation pfz00626   Naphthalene degradation pfz00627   Aminobenzoate degradation pfz00630   Glyoxylate and dicarboxylate metabolism pfz00633   Nitrotoluene degradation pfz00640   Propanoate metabolism pfz00643   Styrene degradation pfz00650   Butanoate metabolism pfz00660   C5-Branched dibasic acid metabolism pfz00670   One carbon pool by folate pfz00680   Methane metabolism pfz00730   Thiamine metabolism pfz00740   Riboflavin metabolism pfz00750   Vitamin B6 metabolism pfz00760   Nicotinate and nicotinamide metabolism pfz00770   Pantothenate and CoA biosynthesis pfz00780   Biotin metabolism pfz00785   Lipoic acid metabolism pfz00790   Folate biosynthesis pfz00860   Porphyrin metabolism pfz00900   Terpenoid backbone biosynthesis pfz00903   Limonene degradation pfz00907   Pinene, camphor and geraniol degradation pfz00910   Nitrogen metabolism pfz00920   Sulfur metabolism pfz00930   Caprolactam degradation pfz00946   Degradation of flavonoids pfz00984   Steroid degradation pfz00996   Biosynthesis of various alkaloids pfz00999   Biosynthesis of various plant secondary metabolites pfz01040   Biosynthesis of unsaturated fatty acids pfz01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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