PATHWAY: pgg01100 Help Entry pgg01100                    Pathway                                 Name Metabolic pathways - Pseudomonas graminis Class BRITE hierarchy Pathway map pgg01100   Metabolic pathways Module pgg_M00002   Glycolysis, core module involving three-carbon compounds [PATH:pgg01100] pgg_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pgg01100] pgg_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pgg01100] pgg_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pgg01100] pgg_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pgg01100] pgg_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pgg01100] pgg_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pgg01100] pgg_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:pgg01100] pgg_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pgg01100] pgg_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pgg01100] pgg_M00015   Proline biosynthesis, glutamate => proline [PATH:pgg01100] pgg_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pgg01100] pgg_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pgg01100] pgg_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pgg01100] pgg_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:pgg01100] pgg_M00021   Cysteine biosynthesis, serine => cysteine [PATH:pgg01100] pgg_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pgg01100] pgg_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:pgg01100] pgg_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pgg01100] pgg_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:pgg01100] pgg_M00034   Methionine salvage pathway [PATH:pgg01100] pgg_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pgg01100] pgg_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:pgg01100] pgg_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pgg01100] pgg_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pgg01100] pgg_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pgg01100] pgg_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pgg01100] pgg_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pgg01100] pgg_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pgg01100] pgg_M00063   CMP-KDO biosynthesis [PATH:pgg01100] pgg_M00082   Fatty acid biosynthesis, initiation [PATH:pgg01100] pgg_M00083   Fatty acid biosynthesis, elongation [PATH:pgg01100] pgg_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:pgg01100] pgg_M00087   beta-Oxidation [PATH:pgg01100] pgg_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pgg01100] pgg_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pgg01100] pgg_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pgg01100] pgg_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pgg01100] pgg_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:pgg01100] pgg_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pgg01100] pgg_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pgg01100] pgg_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pgg01100] pgg_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pgg01100] pgg_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pgg01100] pgg_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pgg01100] pgg_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:pgg01100] pgg_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:pgg01100] pgg_M00149   Succinate dehydrogenase, prokaryotes [PATH:pgg01100] pgg_M00151   Cytochrome bc1 complex respiratory unit [PATH:pgg01100] pgg_M00156   Cytochrome c oxidase, cbb3-type [PATH:pgg01100] pgg_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:pgg01100] pgg_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:pgg01100] pgg_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pgg01100] pgg_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:pgg01100] pgg_M00417   Cytochrome o ubiquinol oxidase [PATH:pgg01100] pgg_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pgg01100] pgg_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pgg01100] pgg_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pgg01100] pgg_M00555   Betaine biosynthesis, choline => betaine [PATH:pgg01100] pgg_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pgg01100] pgg_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pgg01100] pgg_M00621   Glycine cleavage system [PATH:pgg01100] pgg_M00622   Nicotinate degradation, nicotinate => fumarate [PATH:pgg01100] pgg_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pgg01100] pgg_M00793   dTDP-L-rhamnose biosynthesis [PATH:pgg01100] pgg_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pgg01100] pgg_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pgg01100] pgg_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:pgg01100] pgg_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pgg01100] pgg_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pgg01100] pgg_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pgg01100] pgg_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pgg01100] pgg_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pgg01100] pgg_M00957   Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pgg01100] pgg_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:pgg01100] pgg_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:pgg01100] pgg_M00970   Proline degradation, proline => glutamate [PATH:pgg01100] pgg_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:pgg01100] Organism Pseudomonas graminis [GN:pgg] Related pathway pgg00010   Glycolysis / Gluconeogenesis pgg00020   Citrate cycle (TCA cycle) pgg00030   Pentose phosphate pathway pgg00040   Pentose and glucuronate interconversions pgg00051   Fructose and mannose metabolism pgg00052   Galactose metabolism pgg00053   Ascorbate and aldarate metabolism pgg00061   Fatty acid biosynthesis pgg00071   Fatty acid degradation pgg00130   Ubiquinone and other terpenoid-quinone biosynthesis pgg00190   Oxidative phosphorylation pgg00220   Arginine biosynthesis pgg00230   Purine metabolism pgg00240   Pyrimidine metabolism pgg00250   Alanine, aspartate and glutamate metabolism pgg00260   Glycine, serine and threonine metabolism pgg00261   Monobactam biosynthesis pgg00270   Cysteine and methionine metabolism pgg00280   Valine, leucine and isoleucine degradation pgg00290   Valine, leucine and isoleucine biosynthesis pgg00300   Lysine biosynthesis pgg00310   Lysine degradation pgg00311   Penicillin and cephalosporin biosynthesis pgg00330   Arginine and proline metabolism pgg00332   Carbapenem biosynthesis pgg00340   Histidine metabolism pgg00350   Tyrosine metabolism pgg00360   Phenylalanine metabolism pgg00361   Chlorocyclohexane and chlorobenzene degradation pgg00362   Benzoate degradation pgg00364   Fluorobenzoate degradation pgg00380   Tryptophan metabolism pgg00400   Phenylalanine, tyrosine and tryptophan biosynthesis pgg00401   Novobiocin biosynthesis pgg00410   beta-Alanine metabolism pgg00430   Taurine and hypotaurine metabolism pgg00440   Phosphonate and phosphinate metabolism pgg00450   Selenocompound metabolism pgg00460   Cyanoamino acid metabolism pgg00470   D-Amino acid metabolism pgg00480   Glutathione metabolism pgg00500   Starch and sucrose metabolism pgg00520   Amino sugar and nucleotide sugar metabolism pgg00521   Streptomycin biosynthesis pgg00523   Polyketide sugar unit biosynthesis pgg00525   Acarbose and validamycin biosynthesis pgg00540   Lipopolysaccharide biosynthesis pgg00541   O-Antigen nucleotide sugar biosynthesis pgg00543   Exopolysaccharide biosynthesis pgg00550   Peptidoglycan biosynthesis pgg00552   Teichoic acid biosynthesis pgg00561   Glycerolipid metabolism pgg00562   Inositol phosphate metabolism pgg00564   Glycerophospholipid metabolism pgg00592   alpha-Linolenic acid metabolism pgg00620   Pyruvate metabolism pgg00623   Toluene degradation pgg00625   Chloroalkane and chloroalkene degradation pgg00626   Naphthalene degradation pgg00627   Aminobenzoate degradation pgg00630   Glyoxylate and dicarboxylate metabolism pgg00633   Nitrotoluene degradation pgg00640   Propanoate metabolism pgg00643   Styrene degradation pgg00650   Butanoate metabolism pgg00660   C5-Branched dibasic acid metabolism pgg00670   One carbon pool by folate pgg00680   Methane metabolism pgg00730   Thiamine metabolism pgg00740   Riboflavin metabolism pgg00750   Vitamin B6 metabolism pgg00760   Nicotinate and nicotinamide metabolism pgg00770   Pantothenate and CoA biosynthesis pgg00780   Biotin metabolism pgg00785   Lipoic acid metabolism pgg00790   Folate biosynthesis pgg00791   Atrazine degradation pgg00860   Porphyrin metabolism pgg00900   Terpenoid backbone biosynthesis pgg00906   Carotenoid biosynthesis pgg00907   Pinene, camphor and geraniol degradation pgg00910   Nitrogen metabolism pgg00920   Sulfur metabolism pgg00930   Caprolactam degradation pgg00946   Degradation of flavonoids pgg00998   Biosynthesis of various antibiotics pgg00999   Biosynthesis of various plant secondary metabolites pgg01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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