KEGG   PATHWAY: phk00040
Entry
phk00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Paenibacillus hunanensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
phk00040  Pentose and glucuronate interconversions
phk00040

Module
phk_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:phk00040]
Organism
Paenibacillus hunanensis [GN:phk]
Gene
SK066_18580  hypothetical protein [KO:K01728] [EC:4.2.2.2]
SK066_04415  hypothetical protein [KO:K01728] [EC:4.2.2.2]
SK066_20985  oligogalacturonate lyase family protein [KO:K01730] [EC:4.2.2.6]
SK066_15370  cupin domain-containing protein [KO:K26933] [EC:4.2.99.25]
SK066_01100  cupin domain-containing protein [KO:K26933] [EC:4.2.99.25]
SK066_19790  kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase [KO:K01815] [EC:5.3.1.17]
SK066_19780  kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD [KO:K00065] [EC:1.1.1.127]
SK066_03580  uxaC; glucuronate isomerase [KO:K01812] [EC:5.3.1.12]
SK066_15005  tagaturonate reductase [KO:K00041] [EC:1.1.1.58]
SK066_15000  altronate dehydratase family protein [KO:K01685] [EC:4.2.1.7]
SK066_18940  uxuA; mannonate dehydratase [KO:K01686] [EC:4.2.1.8]
SK066_21160  UDP-glucose/GDP-mannose dehydrogenase family protein [KO:K00012] [EC:1.1.1.22]
SK066_03430  UDP-glucose/GDP-mannose dehydrogenase family protein [KO:K00012] [EC:1.1.1.22]
SK066_19815  galU; UTP--glucose-1-phosphate uridylyltransferase GalU [KO:K00963] [EC:2.7.7.9]
SK066_21225  galU; UTP--glucose-1-phosphate uridylyltransferase GalU [KO:K00963] [EC:2.7.7.9]
SK066_03665  galU; UTP--glucose-1-phosphate uridylyltransferase GalU [KO:K00963] [EC:2.7.7.9]
SK066_03670  galU; UTP--glucose-1-phosphate uridylyltransferase GalU [KO:K00963] [EC:2.7.7.9]
SK066_22695  L-ribulose-5-phosphate 4-epimerase [KO:K03077] [EC:5.1.3.4]
SK066_08440  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
SK066_22690  araA; L-arabinose isomerase [KO:K01804] [EC:5.3.1.4]
SK066_07965  FGGY family carbohydrate kinase [KO:K00854] [EC:2.7.1.17]
SK066_19730  xylB; xylulokinase [KO:K00854] [EC:2.7.1.17]
SK066_19735  xylA; xylose isomerase [KO:K01805] [EC:5.3.1.5]
SK066_11715  FAD-binding protein [KO:K00594] [EC:1.1.3.41]
SK066_13260  rhaI; L-rhamnose isomerase [KO:K01820] [EC:5.3.1.14 5.3.1.-]
SK066_13255  rhamnulokinase family protein [KO:K00848] [EC:2.7.1.5]
SK066_12390  rhaD; rhamnulose-1-phosphate aldolase [KO:K01629] [EC:4.1.2.19]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
phk00010  Glycolysis / Gluconeogenesis
phk00020  Citrate cycle (TCA cycle)
phk00030  Pentose phosphate pathway
phk00052  Galactose metabolism
phk00053  Ascorbate and aldarate metabolism
phk00500  Starch and sucrose metabolism
phk00520  Amino sugar and nucleotide sugar metabolism
phk00561  Glycerolipid metabolism
phk00562  Inositol phosphate metabolism
phk00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

DBGET integrated database retrieval system