KEGG   PATHWAY: phz00010
Entry
phz00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Porphyrobacter sp. HT-58-2
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
phz00010  Glycolysis / Gluconeogenesis
phz00010

Module
phz_M00002  Glycolysis, core module involving three-carbon compounds [PATH:phz00010]
phz_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:phz00010]
phz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:phz00010]
Other DBs
GO: 0006096 0006094
Organism
Porphyrobacter sp. HT-58-2 [GN:phz]
Gene
CHX26_06590  glucokinase [KO:K00845] [EC:2.7.1.2]
CHX26_09880  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
CHX26_00820  glpX; fructose-bisphosphatase class II [KO:K11532] [EC:3.1.3.11 3.1.3.37]
CHX26_10235  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
CHX26_11265  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
CHX26_10215  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
CHX26_10220  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
CHX26_01995  gpmA; phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
CHX26_10660  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
CHX26_00370  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
CHX26_10785  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
CHX26_11210  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
CHX26_11205  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
CHX26_11030  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
CHX26_12510  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CHX26_11040  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CHX26_03945  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
CHX26_05710  alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
CHX26_05505  hydroxyacid dehydrogenase [KO:K13979] [EC:1.1.1.2]
CHX26_05005  PQQ-dependent dehydrogenase, methanol/ethanol family [KO:K00114] [EC:1.1.2.8]
CHX26_04980  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
CHX26_06675  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
CHX26_06415  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
CHX26_07400  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
phz00020  Citrate cycle (TCA cycle)
phz00030  Pentose phosphate pathway
phz00500  Starch and sucrose metabolism
phz00620  Pyruvate metabolism
phz00640  Propanoate metabolism
phz00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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