PATHWAY: pib01100 Help Entry pib01100                    Pathway                                 Name Metabolic pathways - Paenibacillus ihbetae Class BRITE hierarchy Pathway map pib01100   Metabolic pathways Module pib_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pib01100] pib_M00002   Glycolysis, core module involving three-carbon compounds [PATH:pib01100] pib_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pib01100] pib_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pib01100] pib_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:pib01100] pib_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pib01100] pib_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pib01100] pib_M00015   Proline biosynthesis, glutamate => proline [PATH:pib01100] pib_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pib01100] pib_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pib01100] pib_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pib01100] pib_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:pib01100] pib_M00021   Cysteine biosynthesis, serine => cysteine [PATH:pib01100] pib_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pib01100] pib_M00026   Histidine biosynthesis, PRPP => histidine [PATH:pib01100] pib_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:pib01100] pib_M00034   Methionine salvage pathway [PATH:pib01100] pib_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pib01100] pib_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pib01100] pib_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pib01100] pib_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pib01100] pib_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pib01100] pib_M00082   Fatty acid biosynthesis, initiation [PATH:pib01100] pib_M00083   Fatty acid biosynthesis, elongation [PATH:pib01100] pib_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:pib01100] pib_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pib01100] pib_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pib01100] pib_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pib01100] pib_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pib01100] pib_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pib01100] pib_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pib01100] pib_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pib01100] pib_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:pib01100] pib_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:pib01100] pib_M00135   GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:pib01100] pib_M00151   Cytochrome bc1 complex respiratory unit [PATH:pib01100] pib_M00155   Cytochrome c oxidase, prokaryotes [PATH:pib01100] pib_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:pib01100] pib_M00168   CAM (Crassulacean acid metabolism), dark [PATH:pib01100] pib_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pib01100] pib_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:pib01100] pib_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:pib01100] pib_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:pib01100] pib_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pib01100] pib_M00526   Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:pib01100] pib_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:pib01100] pib_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:pib01100] pib_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pib01100] pib_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pib01100] pib_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pib01100] pib_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pib01100] pib_M00580   Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:pib01100] pib_M00621   Glycine cleavage system [PATH:pib01100] pib_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:pib01100] pib_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pib01100] pib_M00793   dTDP-L-rhamnose biosynthesis [PATH:pib01100] pib_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pib01100] pib_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pib01100] pib_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pib01100] pib_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pib01100] pib_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:pib01100] pib_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pib01100] pib_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pib01100] pib_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:pib01100] pib_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pib01100] pib_M00970   Proline degradation, proline => glutamate [PATH:pib01100] pib_M00972   Proline metabolism [PATH:pib01100] Organism Paenibacillus ihbetae [GN:pib] Related pathway pib00010   Glycolysis / Gluconeogenesis pib00020   Citrate cycle (TCA cycle) pib00030   Pentose phosphate pathway pib00040   Pentose and glucuronate interconversions pib00051   Fructose and mannose metabolism pib00052   Galactose metabolism pib00053   Ascorbate and aldarate metabolism pib00061   Fatty acid biosynthesis pib00071   Fatty acid degradation pib00130   Ubiquinone and other terpenoid-quinone biosynthesis pib00190   Oxidative phosphorylation pib00220   Arginine biosynthesis pib00230   Purine metabolism pib00240   Pyrimidine metabolism pib00250   Alanine, aspartate and glutamate metabolism pib00260   Glycine, serine and threonine metabolism pib00261   Monobactam biosynthesis pib00270   Cysteine and methionine metabolism pib00280   Valine, leucine and isoleucine degradation pib00290   Valine, leucine and isoleucine biosynthesis pib00300   Lysine biosynthesis pib00310   Lysine degradation pib00311   Penicillin and cephalosporin biosynthesis pib00330   Arginine and proline metabolism pib00332   Carbapenem biosynthesis pib00340   Histidine metabolism pib00350   Tyrosine metabolism pib00360   Phenylalanine metabolism pib00361   Chlorocyclohexane and chlorobenzene degradation pib00362   Benzoate degradation pib00380   Tryptophan metabolism pib00400   Phenylalanine, tyrosine and tryptophan biosynthesis pib00401   Novobiocin biosynthesis pib00410   beta-Alanine metabolism pib00430   Taurine and hypotaurine metabolism pib00440   Phosphonate and phosphinate metabolism pib00450   Selenocompound metabolism pib00460   Cyanoamino acid metabolism pib00470   D-Amino acid metabolism pib00480   Glutathione metabolism pib00500   Starch and sucrose metabolism pib00511   Other glycan degradation pib00520   Amino sugar and nucleotide sugar metabolism pib00521   Streptomycin biosynthesis pib00523   Polyketide sugar unit biosynthesis pib00525   Acarbose and validamycin biosynthesis pib00541   O-Antigen nucleotide sugar biosynthesis pib00542   O-Antigen repeat unit biosynthesis pib00543   Exopolysaccharide biosynthesis pib00550   Peptidoglycan biosynthesis pib00552   Teichoic acid biosynthesis pib00561   Glycerolipid metabolism pib00562   Inositol phosphate metabolism pib00564   Glycerophospholipid metabolism pib00592   alpha-Linolenic acid metabolism pib00600   Sphingolipid metabolism pib00620   Pyruvate metabolism pib00622   Xylene degradation pib00625   Chloroalkane and chloroalkene degradation pib00626   Naphthalene degradation pib00627   Aminobenzoate degradation pib00630   Glyoxylate and dicarboxylate metabolism pib00640   Propanoate metabolism pib00643   Styrene degradation pib00650   Butanoate metabolism pib00660   C5-Branched dibasic acid metabolism pib00670   One carbon pool by folate pib00680   Methane metabolism pib00730   Thiamine metabolism pib00740   Riboflavin metabolism pib00750   Vitamin B6 metabolism pib00760   Nicotinate and nicotinamide metabolism pib00770   Pantothenate and CoA biosynthesis pib00780   Biotin metabolism pib00785   Lipoic acid metabolism pib00790   Folate biosynthesis pib00860   Porphyrin metabolism pib00900   Terpenoid backbone biosynthesis pib00907   Pinene, camphor and geraniol degradation pib00910   Nitrogen metabolism pib00920   Sulfur metabolism pib00946   Degradation of flavonoids pib00998   Biosynthesis of various antibiotics pib00999   Biosynthesis of various plant secondary metabolites pib01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system